Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15727 | 47404;47405;47406 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
N2AB | 14086 | 42481;42482;42483 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
N2A | 13159 | 39700;39701;39702 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
N2B | 6662 | 20209;20210;20211 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
Novex-1 | 6787 | 20584;20585;20586 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
Novex-2 | 6854 | 20785;20786;20787 | chr2:178618279;178618278;178618277 | chr2:179483006;179483005;179483004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1342638829 | -1.278 | 0.959 | N | 0.533 | 0.264 | 0.371157983038 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs1342638829 | -1.278 | 0.959 | N | 0.533 | 0.264 | 0.371157983038 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2036 | likely_benign | 0.2361 | benign | -0.656 | Destabilizing | 0.826 | D | 0.408 | neutral | N | 0.481324974 | None | None | N |
E/C | 0.8686 | likely_pathogenic | 0.8472 | pathogenic | -0.388 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
E/D | 0.2766 | likely_benign | 0.391 | ambiguous | -1.069 | Destabilizing | 0.959 | D | 0.445 | neutral | N | 0.484136203 | None | None | N |
E/F | 0.8343 | likely_pathogenic | 0.8672 | pathogenic | 0.157 | Stabilizing | 0.046 | N | 0.437 | neutral | None | None | None | None | N |
E/G | 0.3032 | likely_benign | 0.3797 | ambiguous | -1.076 | Destabilizing | 0.959 | D | 0.533 | neutral | N | 0.481724233 | None | None | N |
E/H | 0.6533 | likely_pathogenic | 0.7086 | pathogenic | -0.138 | Destabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
E/I | 0.5196 | ambiguous | 0.5755 | pathogenic | 0.509 | Stabilizing | 0.884 | D | 0.538 | neutral | None | None | None | None | N |
E/K | 0.2732 | likely_benign | 0.3583 | ambiguous | -0.58 | Destabilizing | 0.134 | N | 0.174 | neutral | N | 0.449271542 | None | None | N |
E/L | 0.4599 | ambiguous | 0.534 | ambiguous | 0.509 | Stabilizing | 0.02 | N | 0.424 | neutral | None | None | None | None | N |
E/M | 0.5182 | ambiguous | 0.5667 | pathogenic | 0.908 | Stabilizing | 0.579 | D | 0.354 | neutral | None | None | None | None | N |
E/N | 0.4015 | ambiguous | 0.5031 | ambiguous | -1.174 | Destabilizing | 0.969 | D | 0.545 | neutral | None | None | None | None | N |
E/P | 0.6028 | likely_pathogenic | 0.6443 | pathogenic | 0.143 | Stabilizing | 0.997 | D | 0.627 | neutral | None | None | None | None | N |
E/Q | 0.1658 | likely_benign | 0.1879 | benign | -0.965 | Destabilizing | 0.92 | D | 0.511 | neutral | N | 0.483119748 | None | None | N |
E/R | 0.3911 | ambiguous | 0.4668 | ambiguous | -0.294 | Destabilizing | 0.884 | D | 0.501 | neutral | None | None | None | None | N |
E/S | 0.2575 | likely_benign | 0.3037 | benign | -1.531 | Destabilizing | 0.939 | D | 0.431 | neutral | None | None | None | None | N |
E/T | 0.2796 | likely_benign | 0.3189 | benign | -1.17 | Destabilizing | 0.969 | D | 0.485 | neutral | None | None | None | None | N |
E/V | 0.3161 | likely_benign | 0.371 | ambiguous | 0.143 | Stabilizing | 0.704 | D | 0.475 | neutral | N | 0.486630245 | None | None | N |
E/W | 0.938 | likely_pathogenic | 0.9499 | pathogenic | 0.41 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
E/Y | 0.7594 | likely_pathogenic | 0.8041 | pathogenic | 0.424 | Stabilizing | 0.964 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.