Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15728 | 47407;47408;47409 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
N2AB | 14087 | 42484;42485;42486 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
N2A | 13160 | 39703;39704;39705 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
N2B | 6663 | 20212;20213;20214 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
Novex-1 | 6788 | 20587;20588;20589 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
Novex-2 | 6855 | 20788;20789;20790 | chr2:178618276;178618275;178618274 | chr2:179483003;179483002;179483001 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | rs1559849572 | None | 1.0 | D | 0.894 | 0.911 | 0.922020344611 | gnomAD-4.0.0 | 1.59324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86221E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9941 | likely_pathogenic | 0.9962 | pathogenic | -3.037 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Y/C | 0.9689 | likely_pathogenic | 0.9792 | pathogenic | -1.647 | Destabilizing | 1.0 | D | 0.874 | deleterious | D | 0.798424547 | None | None | N |
Y/D | 0.9923 | likely_pathogenic | 0.9951 | pathogenic | -3.665 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | D | 0.798424547 | None | None | N |
Y/E | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -3.451 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/F | 0.4646 | ambiguous | 0.4939 | ambiguous | -1.138 | Destabilizing | 0.999 | D | 0.745 | deleterious | D | 0.686124502 | None | None | N |
Y/G | 0.9817 | likely_pathogenic | 0.9887 | pathogenic | -3.446 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Y/H | 0.9784 | likely_pathogenic | 0.9877 | pathogenic | -2.171 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.748200625 | None | None | N |
Y/I | 0.971 | likely_pathogenic | 0.9716 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
Y/K | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -2.352 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/L | 0.9532 | likely_pathogenic | 0.9577 | pathogenic | -1.667 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
Y/M | 0.9812 | likely_pathogenic | 0.9861 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/N | 0.9344 | likely_pathogenic | 0.9654 | pathogenic | -3.221 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.798732498 | None | None | N |
Y/P | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -2.141 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
Y/Q | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -2.939 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/R | 0.9957 | likely_pathogenic | 0.9965 | pathogenic | -2.184 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/S | 0.9807 | likely_pathogenic | 0.989 | pathogenic | -3.481 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | D | 0.798424547 | None | None | N |
Y/T | 0.9896 | likely_pathogenic | 0.9931 | pathogenic | -3.148 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/V | 0.9466 | likely_pathogenic | 0.9502 | pathogenic | -2.141 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/W | 0.9381 | likely_pathogenic | 0.9472 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.