Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15768 | 47527;47528;47529 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
N2AB | 14127 | 42604;42605;42606 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
N2A | 13200 | 39823;39824;39825 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
N2B | 6703 | 20332;20333;20334 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
Novex-1 | 6828 | 20707;20708;20709 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
Novex-2 | 6895 | 20908;20909;20910 | chr2:178618049;178618048;178618047 | chr2:179482776;179482775;179482774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.454 | N | 0.277 | 0.15 | 0.202086224978 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0854 | likely_benign | 0.0811 | benign | -0.518 | Destabilizing | 0.454 | N | 0.277 | neutral | N | 0.477684889 | None | None | N |
T/C | 0.3589 | ambiguous | 0.3119 | benign | -0.253 | Destabilizing | 0.037 | N | 0.191 | neutral | None | None | None | None | N |
T/D | 0.3309 | likely_benign | 0.3096 | benign | 0.188 | Stabilizing | 0.915 | D | 0.376 | neutral | None | None | None | None | N |
T/E | 0.2367 | likely_benign | 0.2209 | benign | 0.114 | Stabilizing | 0.915 | D | 0.401 | neutral | None | None | None | None | N |
T/F | 0.3032 | likely_benign | 0.2601 | benign | -1.009 | Destabilizing | 0.949 | D | 0.443 | neutral | None | None | None | None | N |
T/G | 0.195 | likely_benign | 0.177 | benign | -0.653 | Destabilizing | 0.007 | N | 0.187 | neutral | None | None | None | None | N |
T/H | 0.2341 | likely_benign | 0.2066 | benign | -1.021 | Destabilizing | 0.998 | D | 0.402 | neutral | None | None | None | None | N |
T/I | 0.1647 | likely_benign | 0.1497 | benign | -0.277 | Destabilizing | 0.669 | D | 0.328 | neutral | N | 0.480190324 | None | None | N |
T/K | 0.149 | likely_benign | 0.1363 | benign | -0.367 | Destabilizing | 0.915 | D | 0.391 | neutral | None | None | None | None | N |
T/L | 0.1227 | likely_benign | 0.1105 | benign | -0.277 | Destabilizing | 0.525 | D | 0.379 | neutral | None | None | None | None | N |
T/M | 0.1076 | likely_benign | 0.103 | benign | 0.042 | Stabilizing | 0.974 | D | 0.397 | neutral | None | None | None | None | N |
T/N | 0.1248 | likely_benign | 0.1189 | benign | -0.151 | Destabilizing | 0.891 | D | 0.369 | neutral | N | 0.486478914 | None | None | N |
T/P | 0.2975 | likely_benign | 0.3123 | benign | -0.329 | Destabilizing | 0.989 | D | 0.423 | neutral | D | 0.529672976 | None | None | N |
T/Q | 0.1823 | likely_benign | 0.1701 | benign | -0.41 | Destabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | N |
T/R | 0.1354 | likely_benign | 0.1181 | benign | -0.113 | Destabilizing | 0.974 | D | 0.425 | neutral | None | None | None | None | N |
T/S | 0.1061 | likely_benign | 0.1 | benign | -0.394 | Destabilizing | 0.625 | D | 0.325 | neutral | N | 0.451470568 | None | None | N |
T/V | 0.129 | likely_benign | 0.1165 | benign | -0.329 | Destabilizing | 0.016 | N | 0.129 | neutral | None | None | None | None | N |
T/W | 0.6111 | likely_pathogenic | 0.5408 | ambiguous | -0.971 | Destabilizing | 0.998 | D | 0.451 | neutral | None | None | None | None | N |
T/Y | 0.3241 | likely_benign | 0.2717 | benign | -0.7 | Destabilizing | 0.974 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.