Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15769 | 47530;47531;47532 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
N2AB | 14128 | 42607;42608;42609 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
N2A | 13201 | 39826;39827;39828 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
N2B | 6704 | 20335;20336;20337 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
Novex-1 | 6829 | 20710;20711;20712 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
Novex-2 | 6896 | 20911;20912;20913 | chr2:178618046;178618045;178618044 | chr2:179482773;179482772;179482771 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | D | 0.671 | 0.387 | 0.348983352498 | gnomAD-4.0.0 | 1.59432E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43365E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1533 | likely_benign | 0.1757 | benign | -0.239 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.495944986 | None | None | N |
D/C | 0.6644 | likely_pathogenic | 0.6903 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
D/E | 0.153 | likely_benign | 0.1649 | benign | -0.265 | Destabilizing | 0.992 | D | 0.399 | neutral | N | 0.465999278 | None | None | N |
D/F | 0.6792 | likely_pathogenic | 0.7018 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
D/G | 0.1452 | likely_benign | 0.1863 | benign | -0.425 | Destabilizing | 0.992 | D | 0.541 | neutral | D | 0.547683761 | None | None | N |
D/H | 0.2909 | likely_benign | 0.286 | benign | -0.219 | Destabilizing | 1.0 | D | 0.671 | neutral | D | 0.57820511 | None | None | N |
D/I | 0.5296 | ambiguous | 0.5579 | ambiguous | 0.195 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/K | 0.3814 | ambiguous | 0.3871 | ambiguous | 0.432 | Stabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
D/L | 0.4945 | ambiguous | 0.5248 | ambiguous | 0.195 | Stabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
D/M | 0.6455 | likely_pathogenic | 0.6784 | pathogenic | 0.394 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
D/N | 0.0925 | likely_benign | 0.0941 | benign | 0.169 | Stabilizing | 0.619 | D | 0.196 | neutral | N | 0.479442455 | None | None | N |
D/P | 0.9214 | likely_pathogenic | 0.9298 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/Q | 0.3164 | likely_benign | 0.3421 | ambiguous | 0.194 | Stabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
D/R | 0.3905 | ambiguous | 0.3975 | ambiguous | 0.492 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
D/S | 0.1085 | likely_benign | 0.1178 | benign | 0.073 | Stabilizing | 0.994 | D | 0.514 | neutral | None | None | None | None | N |
D/T | 0.2385 | likely_benign | 0.2551 | benign | 0.218 | Stabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
D/V | 0.32 | likely_benign | 0.3359 | benign | 0.073 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.534297927 | None | None | N |
D/W | 0.8978 | likely_pathogenic | 0.8927 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
D/Y | 0.3345 | likely_benign | 0.3193 | benign | -0.06 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.625030617 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.