Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15784 | 47575;47576;47577 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
N2AB | 14143 | 42652;42653;42654 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
N2A | 13216 | 39871;39872;39873 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
N2B | 6719 | 20380;20381;20382 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
Novex-1 | 6844 | 20755;20756;20757 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
Novex-2 | 6911 | 20956;20957;20958 | chr2:178618001;178618000;178617999 | chr2:179482728;179482727;179482726 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | None | None | 0.006 | N | 0.201 | 0.189 | 0.323342291347 | gnomAD-4.0.0 | 1.5937E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5024 | ambiguous | 0.5529 | ambiguous | -0.779 | Destabilizing | 0.329 | N | 0.365 | neutral | None | None | None | None | I |
Y/C | 0.3154 | likely_benign | 0.3297 | benign | 0.085 | Stabilizing | 0.993 | D | 0.356 | neutral | N | 0.495648666 | None | None | I |
Y/D | 0.2407 | likely_benign | 0.2724 | benign | 0.945 | Stabilizing | 0.006 | N | 0.239 | neutral | N | 0.393086301 | None | None | I |
Y/E | 0.5237 | ambiguous | 0.5825 | pathogenic | 0.924 | Stabilizing | 0.543 | D | 0.425 | neutral | None | None | None | None | I |
Y/F | 0.1148 | likely_benign | 0.1243 | benign | -0.424 | Destabilizing | 0.006 | N | 0.201 | neutral | N | 0.44125287 | None | None | I |
Y/G | 0.428 | ambiguous | 0.4451 | ambiguous | -0.966 | Destabilizing | 0.495 | N | 0.413 | neutral | None | None | None | None | I |
Y/H | 0.2448 | likely_benign | 0.2751 | benign | 0.136 | Stabilizing | 0.975 | D | 0.359 | neutral | N | 0.471863047 | None | None | I |
Y/I | 0.5469 | ambiguous | 0.6298 | pathogenic | -0.312 | Destabilizing | 0.704 | D | 0.427 | neutral | None | None | None | None | I |
Y/K | 0.5275 | ambiguous | 0.6153 | pathogenic | 0.166 | Stabilizing | 0.704 | D | 0.466 | neutral | None | None | None | None | I |
Y/L | 0.5648 | likely_pathogenic | 0.6143 | pathogenic | -0.312 | Destabilizing | 0.329 | N | 0.367 | neutral | None | None | None | None | I |
Y/M | 0.5641 | likely_pathogenic | 0.6224 | pathogenic | -0.081 | Destabilizing | 0.981 | D | 0.353 | neutral | None | None | None | None | I |
Y/N | 0.1271 | likely_benign | 0.1383 | benign | -0.002 | Destabilizing | 0.473 | N | 0.457 | neutral | N | 0.463472577 | None | None | I |
Y/P | 0.9596 | likely_pathogenic | 0.9669 | pathogenic | -0.448 | Destabilizing | 0.944 | D | 0.413 | neutral | None | None | None | None | I |
Y/Q | 0.4951 | ambiguous | 0.5598 | ambiguous | 0.021 | Stabilizing | 0.944 | D | 0.393 | neutral | None | None | None | None | I |
Y/R | 0.4494 | ambiguous | 0.5378 | ambiguous | 0.463 | Stabilizing | 0.944 | D | 0.42 | neutral | None | None | None | None | I |
Y/S | 0.212 | likely_benign | 0.2582 | benign | -0.468 | Destabilizing | 0.029 | N | 0.169 | neutral | N | 0.460460241 | None | None | I |
Y/T | 0.3526 | ambiguous | 0.4254 | ambiguous | -0.4 | Destabilizing | 0.543 | D | 0.442 | neutral | None | None | None | None | I |
Y/V | 0.4372 | ambiguous | 0.5092 | ambiguous | -0.448 | Destabilizing | 0.704 | D | 0.448 | neutral | None | None | None | None | I |
Y/W | 0.494 | ambiguous | 0.5159 | ambiguous | -0.524 | Destabilizing | 0.007 | N | 0.227 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.