Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15800 | 47623;47624;47625 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
N2AB | 14159 | 42700;42701;42702 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
N2A | 13232 | 39919;39920;39921 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
N2B | 6735 | 20428;20429;20430 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
Novex-1 | 6860 | 20803;20804;20805 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
Novex-2 | 6927 | 21004;21005;21006 | chr2:178617953;178617952;178617951 | chr2:179482680;179482679;179482678 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs114145817 | 0.386 | 0.801 | N | 0.394 | 0.21 | 0.181679512989 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
K/N | rs114145817 | 0.386 | 0.801 | N | 0.394 | 0.21 | 0.181679512989 | gnomAD-4.0.0 | 1.50613E-05 | None | None | None | None | N | None | 2.99401E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70984E-05 | 0 | 3.31664E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5813 | likely_pathogenic | 0.6097 | pathogenic | -0.559 | Destabilizing | 0.688 | D | 0.441 | neutral | None | None | None | None | N |
K/C | 0.8704 | likely_pathogenic | 0.8641 | pathogenic | -0.548 | Destabilizing | 0.998 | D | 0.553 | neutral | None | None | None | None | N |
K/D | 0.8449 | likely_pathogenic | 0.8632 | pathogenic | 0.146 | Stabilizing | 0.915 | D | 0.439 | neutral | None | None | None | None | N |
K/E | 0.3715 | ambiguous | 0.3999 | ambiguous | 0.222 | Stabilizing | 0.625 | D | 0.435 | neutral | N | 0.476519691 | None | None | N |
K/F | 0.9307 | likely_pathogenic | 0.939 | pathogenic | -0.47 | Destabilizing | 0.991 | D | 0.537 | neutral | None | None | None | None | N |
K/G | 0.6594 | likely_pathogenic | 0.671 | pathogenic | -0.872 | Destabilizing | 0.915 | D | 0.518 | neutral | None | None | None | None | N |
K/H | 0.5389 | ambiguous | 0.5557 | ambiguous | -1.229 | Destabilizing | 0.974 | D | 0.45 | neutral | None | None | None | None | N |
K/I | 0.6447 | likely_pathogenic | 0.6524 | pathogenic | 0.228 | Stabilizing | 0.974 | D | 0.544 | neutral | None | None | None | None | N |
K/L | 0.673 | likely_pathogenic | 0.69 | pathogenic | 0.228 | Stabilizing | 0.842 | D | 0.518 | neutral | None | None | None | None | N |
K/M | 0.5092 | ambiguous | 0.5202 | ambiguous | 0.166 | Stabilizing | 0.989 | D | 0.448 | neutral | D | 0.524737777 | None | None | N |
K/N | 0.7193 | likely_pathogenic | 0.754 | pathogenic | -0.218 | Destabilizing | 0.801 | D | 0.394 | neutral | N | 0.48570977 | None | None | N |
K/P | 0.8235 | likely_pathogenic | 0.8382 | pathogenic | -0.004 | Destabilizing | 0.991 | D | 0.451 | neutral | None | None | None | None | N |
K/Q | 0.221 | likely_benign | 0.2348 | benign | -0.356 | Destabilizing | 0.801 | D | 0.442 | neutral | N | 0.4825142 | None | None | N |
K/R | 0.0833 | likely_benign | 0.0822 | benign | -0.407 | Destabilizing | 0.002 | N | 0.171 | neutral | N | 0.449423591 | None | None | N |
K/S | 0.67 | likely_pathogenic | 0.6922 | pathogenic | -0.922 | Destabilizing | 0.842 | D | 0.384 | neutral | None | None | None | None | N |
K/T | 0.4297 | ambiguous | 0.4509 | ambiguous | -0.648 | Destabilizing | 0.891 | D | 0.427 | neutral | N | 0.462988949 | None | None | N |
K/V | 0.6044 | likely_pathogenic | 0.6112 | pathogenic | -0.004 | Destabilizing | 0.974 | D | 0.516 | neutral | None | None | None | None | N |
K/W | 0.9185 | likely_pathogenic | 0.9109 | pathogenic | -0.324 | Destabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | N |
K/Y | 0.8514 | likely_pathogenic | 0.8609 | pathogenic | -0.018 | Destabilizing | 0.991 | D | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.