Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15817 | 47674;47675;47676 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
N2AB | 14176 | 42751;42752;42753 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
N2A | 13249 | 39970;39971;39972 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
N2B | 6752 | 20479;20480;20481 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
Novex-1 | 6877 | 20854;20855;20856 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
Novex-2 | 6944 | 21055;21056;21057 | chr2:178617902;178617901;178617900 | chr2:179482629;179482628;179482627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.999 | D | 0.661 | 0.388 | 0.429780353351 | gnomAD-4.0.0 | 1.59341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.071 | likely_benign | 0.073 | benign | -0.668 | Destabilizing | 0.64 | D | 0.47 | neutral | N | 0.471360301 | None | None | N |
S/C | 0.114 | likely_benign | 0.1074 | benign | -0.425 | Destabilizing | 0.999 | D | 0.661 | neutral | D | 0.596482074 | None | None | N |
S/D | 0.3351 | likely_benign | 0.3418 | ambiguous | 0.371 | Stabilizing | 0.919 | D | 0.447 | neutral | None | None | None | None | N |
S/E | 0.2935 | likely_benign | 0.2971 | benign | 0.377 | Stabilizing | 0.851 | D | 0.436 | neutral | None | None | None | None | N |
S/F | 0.1442 | likely_benign | 0.1396 | benign | -0.976 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | D | 0.548663539 | None | None | N |
S/G | 0.1 | likely_benign | 0.1051 | benign | -0.899 | Destabilizing | 0.034 | N | 0.283 | neutral | None | None | None | None | N |
S/H | 0.1982 | likely_benign | 0.1927 | benign | -1.248 | Destabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | N |
S/I | 0.1376 | likely_benign | 0.1361 | benign | -0.161 | Destabilizing | 0.996 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/K | 0.326 | likely_benign | 0.3158 | benign | -0.327 | Destabilizing | 0.851 | D | 0.443 | neutral | None | None | None | None | N |
S/L | 0.0951 | likely_benign | 0.091 | benign | -0.161 | Destabilizing | 0.988 | D | 0.6 | neutral | None | None | None | None | N |
S/M | 0.1562 | likely_benign | 0.151 | benign | -0.135 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
S/N | 0.1253 | likely_benign | 0.1256 | benign | -0.336 | Destabilizing | 0.919 | D | 0.481 | neutral | None | None | None | None | N |
S/P | 0.7504 | likely_pathogenic | 0.7661 | pathogenic | -0.297 | Destabilizing | 0.995 | D | 0.641 | neutral | D | 0.554660909 | None | None | N |
S/Q | 0.2633 | likely_benign | 0.2669 | benign | -0.389 | Destabilizing | 0.507 | D | 0.411 | neutral | None | None | None | None | N |
S/R | 0.262 | likely_benign | 0.2605 | benign | -0.296 | Destabilizing | 0.976 | D | 0.599 | neutral | None | None | None | None | N |
S/T | 0.0621 | likely_benign | 0.0629 | benign | -0.39 | Destabilizing | 0.946 | D | 0.445 | neutral | N | 0.475494576 | None | None | N |
S/V | 0.1392 | likely_benign | 0.1382 | benign | -0.297 | Destabilizing | 0.988 | D | 0.617 | neutral | None | None | None | None | N |
S/W | 0.2871 | likely_benign | 0.2844 | benign | -0.974 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
S/Y | 0.1478 | likely_benign | 0.141 | benign | -0.664 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | N | 0.475026902 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.