Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15828 | 47707;47708;47709 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
N2AB | 14187 | 42784;42785;42786 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
N2A | 13260 | 40003;40004;40005 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
N2B | 6763 | 20512;20513;20514 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
Novex-1 | 6888 | 20887;20888;20889 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
Novex-2 | 6955 | 21088;21089;21090 | chr2:178617869;178617868;178617867 | chr2:179482596;179482595;179482594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.473 | 0.311 | 0.251639045875 | gnomAD-4.0.0 | 1.59358E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77948E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/G | None | None | 1.0 | D | 0.705 | 0.571 | 0.572690963233 | gnomAD-4.0.0 | 2.73854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59978E-06 | 0 | 0 |
E/K | rs1246983682 | None | 0.999 | N | 0.529 | 0.369 | 0.406806705197 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 1.01626E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.284 | likely_benign | 0.2568 | benign | -0.828 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.503895116 | None | None | N |
E/C | 0.8985 | likely_pathogenic | 0.8801 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
E/D | 0.2407 | likely_benign | 0.1946 | benign | -1.222 | Destabilizing | 0.999 | D | 0.473 | neutral | N | 0.508627576 | None | None | N |
E/F | 0.823 | likely_pathogenic | 0.7894 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/G | 0.406 | ambiguous | 0.3402 | ambiguous | -1.282 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.604640679 | None | None | N |
E/H | 0.7697 | likely_pathogenic | 0.7055 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/I | 0.4583 | ambiguous | 0.4349 | ambiguous | 0.452 | Stabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
E/K | 0.5491 | ambiguous | 0.4534 | ambiguous | -0.799 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.482665372 | None | None | N |
E/L | 0.5545 | ambiguous | 0.4812 | ambiguous | 0.452 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/M | 0.5279 | ambiguous | 0.4884 | ambiguous | 1.083 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/N | 0.4412 | ambiguous | 0.399 | ambiguous | -1.333 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/P | 0.7445 | likely_pathogenic | 0.6965 | pathogenic | 0.046 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Q | 0.3146 | likely_benign | 0.274 | benign | -1.084 | Destabilizing | 1.0 | D | 0.61 | neutral | N | 0.476139144 | None | None | N |
E/R | 0.6977 | likely_pathogenic | 0.6047 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/S | 0.3767 | ambiguous | 0.3324 | benign | -1.844 | Destabilizing | 0.999 | D | 0.588 | neutral | None | None | None | None | N |
E/T | 0.3799 | ambiguous | 0.3446 | ambiguous | -1.44 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/V | 0.3057 | likely_benign | 0.2784 | benign | 0.046 | Stabilizing | 1.0 | D | 0.765 | deleterious | N | 0.508177693 | None | None | N |
E/W | 0.9305 | likely_pathogenic | 0.9081 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/Y | 0.7234 | likely_pathogenic | 0.6665 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.