Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15829 | 47710;47711;47712 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
N2AB | 14188 | 42787;42788;42789 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
N2A | 13261 | 40006;40007;40008 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
N2B | 6764 | 20515;20516;20517 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
Novex-1 | 6889 | 20890;20891;20892 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
Novex-2 | 6956 | 21091;21092;21093 | chr2:178617866;178617865;178617864 | chr2:179482593;179482592;179482591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 1.0 | D | 0.84 | 0.869 | 0.854435163953 | gnomAD-4.0.0 | 1.59363E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4334E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9645 | likely_pathogenic | 0.9662 | pathogenic | -2.975 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
Y/C | 0.6596 | likely_pathogenic | 0.686 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.773711393 | None | None | N |
Y/D | 0.9854 | likely_pathogenic | 0.9876 | pathogenic | -3.434 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.804567791 | None | None | N |
Y/E | 0.9936 | likely_pathogenic | 0.9937 | pathogenic | -3.209 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/F | 0.1988 | likely_benign | 0.2289 | benign | -1.046 | Destabilizing | 0.999 | D | 0.757 | deleterious | D | 0.693255757 | None | None | N |
Y/G | 0.9626 | likely_pathogenic | 0.9622 | pathogenic | -3.398 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/H | 0.8497 | likely_pathogenic | 0.8894 | pathogenic | -2.162 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.804567791 | None | None | N |
Y/I | 0.8328 | likely_pathogenic | 0.8191 | pathogenic | -1.558 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9801 | likely_pathogenic | 0.9799 | pathogenic | -2.108 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/L | 0.8461 | likely_pathogenic | 0.8324 | pathogenic | -1.558 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
Y/M | 0.9063 | likely_pathogenic | 0.9104 | pathogenic | -1.255 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/N | 0.8631 | likely_pathogenic | 0.8718 | pathogenic | -2.958 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.773999782 | None | None | N |
Y/P | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
Y/Q | 0.9799 | likely_pathogenic | 0.9825 | pathogenic | -2.656 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Y/R | 0.9574 | likely_pathogenic | 0.959 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.9419 | likely_pathogenic | 0.9453 | pathogenic | -3.252 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.754855634 | None | None | N |
Y/T | 0.9625 | likely_pathogenic | 0.9588 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/V | 0.7137 | likely_pathogenic | 0.6856 | pathogenic | -2.047 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
Y/W | 0.8301 | likely_pathogenic | 0.86 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.