Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15860 | 47803;47804;47805 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
N2AB | 14219 | 42880;42881;42882 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
N2A | 13292 | 40099;40100;40101 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
N2B | 6795 | 20608;20609;20610 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
Novex-1 | 6920 | 20983;20984;20985 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
Novex-2 | 6987 | 21184;21185;21186 | chr2:178617507;178617506;178617505 | chr2:179482234;179482233;179482232 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs754280245 | -2.506 | 1.0 | D | 0.789 | 0.621 | None | gnomAD-2.1.1 | 2.34E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.99E-05 | 0 |
P/S | rs754280245 | -2.506 | 1.0 | D | 0.789 | 0.621 | None | gnomAD-4.0.0 | 1.33754E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.34751E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7887 | likely_pathogenic | 0.8582 | pathogenic | -1.664 | Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.766726748 | None | None | N |
P/C | 0.9806 | likely_pathogenic | 0.9881 | pathogenic | -2.118 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/D | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -3.375 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
P/E | 0.9964 | likely_pathogenic | 0.9973 | pathogenic | -3.297 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
P/F | 0.9987 | likely_pathogenic | 0.9992 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/G | 0.9799 | likely_pathogenic | 0.9859 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/H | 0.9951 | likely_pathogenic | 0.9968 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
P/I | 0.9833 | likely_pathogenic | 0.9886 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/K | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -1.617 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/L | 0.949 | likely_pathogenic | 0.9656 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.800771295 | None | None | N |
P/M | 0.9924 | likely_pathogenic | 0.995 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/N | 0.9978 | likely_pathogenic | 0.9985 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/Q | 0.9929 | likely_pathogenic | 0.9954 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.800091179 | None | None | N |
P/R | 0.9909 | likely_pathogenic | 0.9932 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.800091179 | None | None | N |
P/S | 0.9709 | likely_pathogenic | 0.9838 | pathogenic | -2.297 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.746121486 | None | None | N |
P/T | 0.9672 | likely_pathogenic | 0.9763 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | D | 0.647619774 | None | None | N |
P/V | 0.9529 | likely_pathogenic | 0.9646 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
P/W | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
P/Y | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.