Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15870 | 47833;47834;47835 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
N2AB | 14229 | 42910;42911;42912 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
N2A | 13302 | 40129;40130;40131 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
N2B | 6805 | 20638;20639;20640 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
Novex-1 | 6930 | 21013;21014;21015 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
Novex-2 | 6997 | 21214;21215;21216 | chr2:178617477;178617476;178617475 | chr2:179482204;179482203;179482202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.931 | D | 0.667 | 0.307 | 0.275215494804 | gnomAD-4.0.0 | 1.63927E-06 | None | None | None | None | N | None | 0 | 2.58345E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1657 | likely_benign | 0.1979 | benign | -0.23 | Destabilizing | 0.201 | N | 0.585 | neutral | N | 0.478200815 | None | None | N |
D/C | 0.5233 | ambiguous | 0.5631 | ambiguous | 0.195 | Stabilizing | 0.982 | D | 0.692 | prob.neutral | None | None | None | None | N |
D/E | 0.1215 | likely_benign | 0.146 | benign | -0.298 | Destabilizing | 0.002 | N | 0.161 | neutral | N | 0.458705987 | None | None | N |
D/F | 0.4419 | ambiguous | 0.5081 | ambiguous | -0.315 | Destabilizing | 0.982 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/G | 0.1689 | likely_benign | 0.1834 | benign | -0.398 | Destabilizing | 0.334 | N | 0.576 | neutral | N | 0.5035633 | None | None | N |
D/H | 0.2477 | likely_benign | 0.2769 | benign | -0.184 | Destabilizing | 0.931 | D | 0.667 | neutral | D | 0.561869517 | None | None | N |
D/I | 0.2728 | likely_benign | 0.3406 | ambiguous | 0.154 | Stabilizing | 0.826 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/K | 0.2759 | likely_benign | 0.3104 | benign | 0.495 | Stabilizing | 0.25 | N | 0.611 | neutral | None | None | None | None | N |
D/L | 0.2574 | likely_benign | 0.3078 | benign | 0.154 | Stabilizing | 0.7 | D | 0.728 | prob.delet. | None | None | None | None | N |
D/M | 0.5321 | ambiguous | 0.6071 | pathogenic | 0.337 | Stabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/N | 0.0972 | likely_benign | 0.1126 | benign | 0.239 | Stabilizing | 0.004 | N | 0.217 | neutral | N | 0.476551679 | None | None | N |
D/P | 0.6796 | likely_pathogenic | 0.7249 | pathogenic | 0.048 | Stabilizing | 0.826 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/Q | 0.256 | likely_benign | 0.2963 | benign | 0.242 | Stabilizing | 0.539 | D | 0.595 | neutral | None | None | None | None | N |
D/R | 0.3227 | likely_benign | 0.361 | ambiguous | 0.55 | Stabilizing | 0.539 | D | 0.694 | prob.neutral | None | None | None | None | N |
D/S | 0.1293 | likely_benign | 0.1483 | benign | 0.152 | Stabilizing | 0.25 | N | 0.473 | neutral | None | None | None | None | N |
D/T | 0.2228 | likely_benign | 0.2692 | benign | 0.282 | Stabilizing | 0.7 | D | 0.653 | neutral | None | None | None | None | N |
D/V | 0.1768 | likely_benign | 0.2208 | benign | 0.048 | Stabilizing | 0.638 | D | 0.726 | prob.delet. | D | 0.566644813 | None | None | N |
D/W | 0.8071 | likely_pathogenic | 0.8304 | pathogenic | -0.223 | Destabilizing | 0.982 | D | 0.675 | neutral | None | None | None | None | N |
D/Y | 0.1903 | likely_benign | 0.2122 | benign | -0.079 | Destabilizing | 0.976 | D | 0.706 | prob.neutral | D | 0.609631232 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.