Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15885 | 47878;47879;47880 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
N2AB | 14244 | 42955;42956;42957 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
N2A | 13317 | 40174;40175;40176 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
N2B | 6820 | 20683;20684;20685 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
Novex-1 | 6945 | 21058;21059;21060 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
Novex-2 | 7012 | 21259;21260;21261 | chr2:178617432;178617431;178617430 | chr2:179482159;179482158;179482157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.012 | N | 0.121 | 0.129 | 0.173771789658 | gnomAD-4.0.0 | 1.63879E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.09023E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3873 | ambiguous | 0.3937 | ambiguous | 0.009 | Stabilizing | 0.525 | D | 0.369 | neutral | None | None | None | None | N |
K/C | 0.6974 | likely_pathogenic | 0.6734 | pathogenic | -0.177 | Destabilizing | 0.998 | D | 0.327 | neutral | None | None | None | None | N |
K/D | 0.5956 | likely_pathogenic | 0.5828 | pathogenic | 0.101 | Stabilizing | 0.525 | D | 0.351 | neutral | None | None | None | None | N |
K/E | 0.2097 | likely_benign | 0.2062 | benign | 0.103 | Stabilizing | 0.012 | N | 0.121 | neutral | N | 0.43193958 | None | None | N |
K/F | 0.7511 | likely_pathogenic | 0.7238 | pathogenic | -0.238 | Destabilizing | 0.991 | D | 0.361 | neutral | None | None | None | None | N |
K/G | 0.5421 | ambiguous | 0.5456 | ambiguous | -0.183 | Destabilizing | 0.688 | D | 0.381 | neutral | None | None | None | None | N |
K/H | 0.2872 | likely_benign | 0.2553 | benign | -0.498 | Destabilizing | 0.974 | D | 0.349 | neutral | None | None | None | None | N |
K/I | 0.4202 | ambiguous | 0.4188 | ambiguous | 0.433 | Stabilizing | 0.934 | D | 0.387 | neutral | N | 0.452738982 | None | None | N |
K/L | 0.3946 | ambiguous | 0.3916 | ambiguous | 0.433 | Stabilizing | 0.842 | D | 0.431 | neutral | None | None | None | None | N |
K/M | 0.2562 | likely_benign | 0.2568 | benign | 0.267 | Stabilizing | 0.991 | D | 0.34 | neutral | None | None | None | None | N |
K/N | 0.4029 | ambiguous | 0.4091 | ambiguous | 0.253 | Stabilizing | 0.051 | N | 0.156 | neutral | N | 0.428908365 | None | None | N |
K/P | 0.9392 | likely_pathogenic | 0.9328 | pathogenic | 0.32 | Stabilizing | 0.915 | D | 0.398 | neutral | None | None | None | None | N |
K/Q | 0.1432 | likely_benign | 0.1358 | benign | 0.071 | Stabilizing | 0.669 | D | 0.36 | neutral | N | 0.447919158 | None | None | N |
K/R | 0.0881 | likely_benign | 0.0879 | benign | -0.03 | Destabilizing | 0.801 | D | 0.341 | neutral | N | 0.442148701 | None | None | N |
K/S | 0.3947 | ambiguous | 0.3904 | ambiguous | -0.237 | Destabilizing | 0.08 | N | 0.097 | neutral | None | None | None | None | N |
K/T | 0.1963 | likely_benign | 0.1942 | benign | -0.088 | Destabilizing | 0.051 | N | 0.201 | neutral | N | 0.445355088 | None | None | N |
K/V | 0.362 | ambiguous | 0.3645 | ambiguous | 0.32 | Stabilizing | 0.842 | D | 0.411 | neutral | None | None | None | None | N |
K/W | 0.7685 | likely_pathogenic | 0.7237 | pathogenic | -0.255 | Destabilizing | 0.998 | D | 0.39 | neutral | None | None | None | None | N |
K/Y | 0.5786 | likely_pathogenic | 0.5187 | ambiguous | 0.108 | Stabilizing | 0.991 | D | 0.371 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.