Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15901 | 47926;47927;47928 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
N2AB | 14260 | 43003;43004;43005 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
N2A | 13333 | 40222;40223;40224 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
N2B | 6836 | 20731;20732;20733 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
Novex-1 | 6961 | 21106;21107;21108 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
Novex-2 | 7028 | 21307;21308;21309 | chr2:178617384;178617383;178617382 | chr2:179482111;179482110;179482109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs530338718 | -0.244 | 0.978 | N | 0.513 | 0.311 | 0.371903410333 | gnomAD-2.1.1 | 4.62E-06 | None | None | None | None | N | None | 0 | 3.48E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs530338718 | -0.244 | 0.978 | N | 0.513 | 0.311 | 0.371903410333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs530338718 | -0.244 | 0.978 | N | 0.513 | 0.311 | 0.371903410333 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs530338718 | -0.244 | 0.978 | N | 0.513 | 0.311 | 0.371903410333 | gnomAD-4.0.0 | 2.51869E-06 | None | None | None | None | N | None | 0 | 3.67188E-05 | None | 0 | 0 | None | 0 | 0 | 1.70922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1206 | likely_benign | 0.1138 | benign | -0.7 | Destabilizing | 0.989 | D | 0.531 | neutral | N | 0.473589396 | None | None | N |
E/C | 0.8648 | likely_pathogenic | 0.8508 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/D | 0.1566 | likely_benign | 0.1553 | benign | -0.873 | Destabilizing | 0.104 | N | 0.237 | neutral | N | 0.451456569 | None | None | N |
E/F | 0.7695 | likely_pathogenic | 0.7537 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/G | 0.223 | likely_benign | 0.2013 | benign | -1.014 | Destabilizing | 0.994 | D | 0.579 | neutral | N | 0.478198163 | None | None | N |
E/H | 0.5818 | likely_pathogenic | 0.5786 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.463 | neutral | None | None | None | None | N |
E/I | 0.2946 | likely_benign | 0.2965 | benign | 0.139 | Stabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
E/K | 0.2171 | likely_benign | 0.2109 | benign | -0.427 | Destabilizing | 0.978 | D | 0.513 | neutral | N | 0.460355969 | None | None | N |
E/L | 0.406 | ambiguous | 0.3895 | ambiguous | 0.139 | Stabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
E/M | 0.4428 | ambiguous | 0.4323 | ambiguous | 0.378 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/N | 0.3349 | likely_benign | 0.3333 | benign | -0.853 | Destabilizing | 0.998 | D | 0.47 | neutral | None | None | None | None | N |
E/P | 0.5696 | likely_pathogenic | 0.5621 | ambiguous | -0.119 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
E/Q | 0.2149 | likely_benign | 0.2087 | benign | -0.746 | Destabilizing | 0.889 | D | 0.226 | neutral | N | 0.482459585 | None | None | N |
E/R | 0.3908 | ambiguous | 0.3783 | ambiguous | -0.098 | Destabilizing | 0.998 | D | 0.475 | neutral | None | None | None | None | N |
E/S | 0.2358 | likely_benign | 0.2311 | benign | -1.086 | Destabilizing | 0.992 | D | 0.485 | neutral | None | None | None | None | N |
E/T | 0.2585 | likely_benign | 0.2594 | benign | -0.834 | Destabilizing | 0.999 | D | 0.491 | neutral | None | None | None | None | N |
E/V | 0.1621 | likely_benign | 0.1599 | benign | -0.119 | Destabilizing | 0.998 | D | 0.615 | neutral | N | 0.469215362 | None | None | N |
E/W | 0.9094 | likely_pathogenic | 0.9009 | pathogenic | 0.008 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.6227 | likely_pathogenic | 0.6028 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.