Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15903 | 47932;47933;47934 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
N2AB | 14262 | 43009;43010;43011 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
N2A | 13335 | 40228;40229;40230 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
N2B | 6838 | 20737;20738;20739 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
Novex-1 | 6963 | 21112;21113;21114 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
Novex-2 | 7030 | 21313;21314;21315 | chr2:178617378;178617377;178617376 | chr2:179482105;179482104;179482103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs753276843 | 0.099 | 0.891 | N | 0.254 | 0.09 | 0.246215685461 | gnomAD-2.1.1 | 1.85E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.03E-05 | 0 |
K/R | rs753276843 | 0.099 | 0.891 | N | 0.254 | 0.09 | 0.246215685461 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs753276843 | 0.099 | 0.891 | N | 0.254 | 0.09 | 0.246215685461 | gnomAD-4.0.0 | 1.00779E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.28183E-05 | 0 | 1.62676E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.246 | likely_benign | 0.2511 | benign | 0.047 | Stabilizing | 0.525 | D | 0.322 | neutral | None | None | None | None | N |
K/C | 0.5657 | likely_pathogenic | 0.6075 | pathogenic | 0.015 | Stabilizing | 0.998 | D | 0.377 | neutral | None | None | None | None | N |
K/D | 0.348 | ambiguous | 0.3576 | ambiguous | -0.02 | Destabilizing | 0.842 | D | 0.259 | neutral | None | None | None | None | N |
K/E | 0.1349 | likely_benign | 0.1312 | benign | -0.022 | Destabilizing | 0.801 | D | 0.294 | neutral | N | 0.404605039 | None | None | N |
K/F | 0.6808 | likely_pathogenic | 0.6981 | pathogenic | -0.175 | Destabilizing | 0.974 | D | 0.365 | neutral | None | None | None | None | N |
K/G | 0.2672 | likely_benign | 0.2592 | benign | -0.153 | Destabilizing | 0.842 | D | 0.281 | neutral | None | None | None | None | N |
K/H | 0.2669 | likely_benign | 0.3055 | benign | -0.518 | Destabilizing | 0.991 | D | 0.301 | neutral | None | None | None | None | N |
K/I | 0.3527 | ambiguous | 0.3543 | ambiguous | 0.497 | Stabilizing | 0.934 | D | 0.371 | neutral | N | 0.453680077 | None | None | N |
K/L | 0.3169 | likely_benign | 0.3203 | benign | 0.497 | Stabilizing | 0.728 | D | 0.275 | neutral | None | None | None | None | N |
K/M | 0.1851 | likely_benign | 0.1911 | benign | 0.368 | Stabilizing | 0.991 | D | 0.298 | neutral | None | None | None | None | N |
K/N | 0.2046 | likely_benign | 0.2055 | benign | 0.38 | Stabilizing | 0.801 | D | 0.213 | neutral | N | 0.429983602 | None | None | N |
K/P | 0.8108 | likely_pathogenic | 0.8297 | pathogenic | 0.375 | Stabilizing | 0.974 | D | 0.311 | neutral | None | None | None | None | N |
K/Q | 0.1176 | likely_benign | 0.1273 | benign | 0.176 | Stabilizing | 0.966 | D | 0.299 | neutral | N | 0.448178496 | None | None | N |
K/R | 0.0899 | likely_benign | 0.0963 | benign | -0.012 | Destabilizing | 0.891 | D | 0.254 | neutral | N | 0.432986046 | None | None | N |
K/S | 0.2037 | likely_benign | 0.2025 | benign | -0.068 | Destabilizing | 0.172 | N | 0.149 | neutral | None | None | None | None | N |
K/T | 0.1002 | likely_benign | 0.1007 | benign | 0.071 | Stabilizing | 0.007 | N | 0.115 | neutral | N | 0.336473789 | None | None | N |
K/V | 0.2954 | likely_benign | 0.2934 | benign | 0.375 | Stabilizing | 0.728 | D | 0.291 | neutral | None | None | None | None | N |
K/W | 0.7103 | likely_pathogenic | 0.7384 | pathogenic | -0.199 | Destabilizing | 0.998 | D | 0.421 | neutral | None | None | None | None | N |
K/Y | 0.555 | ambiguous | 0.5935 | pathogenic | 0.155 | Stabilizing | 0.991 | D | 0.337 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.