Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15905 | 47938;47939;47940 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
N2AB | 14264 | 43015;43016;43017 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
N2A | 13337 | 40234;40235;40236 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
N2B | 6840 | 20743;20744;20745 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
Novex-1 | 6965 | 21118;21119;21120 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
Novex-2 | 7032 | 21319;21320;21321 | chr2:178617372;178617371;178617370 | chr2:179482099;179482098;179482097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.001 | N | 0.119 | 0.122 | 0.124217242631 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1523 | likely_benign | 0.1634 | benign | -0.347 | Destabilizing | 0.228 | N | 0.312 | neutral | None | None | None | None | I |
N/C | 0.2588 | likely_benign | 0.236 | benign | 0.385 | Stabilizing | 0.983 | D | 0.322 | neutral | None | None | None | None | I |
N/D | 0.1187 | likely_benign | 0.1169 | benign | 0.262 | Stabilizing | 0.001 | N | 0.119 | neutral | N | 0.406523451 | None | None | I |
N/E | 0.2143 | likely_benign | 0.2211 | benign | 0.245 | Stabilizing | 0.061 | N | 0.239 | neutral | None | None | None | None | I |
N/F | 0.4712 | ambiguous | 0.4796 | ambiguous | -0.643 | Destabilizing | 0.716 | D | 0.349 | neutral | None | None | None | None | I |
N/G | 0.2485 | likely_benign | 0.2564 | benign | -0.538 | Destabilizing | 0.228 | N | 0.25 | neutral | None | None | None | None | I |
N/H | 0.1042 | likely_benign | 0.0985 | benign | -0.555 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.454985709 | None | None | I |
N/I | 0.1467 | likely_benign | 0.1447 | benign | 0.075 | Stabilizing | 0.794 | D | 0.369 | neutral | N | 0.466802546 | None | None | I |
N/K | 0.1499 | likely_benign | 0.1477 | benign | 0.021 | Stabilizing | None | N | 0.095 | neutral | N | 0.370822991 | None | None | I |
N/L | 0.191 | likely_benign | 0.1953 | benign | 0.075 | Stabilizing | 0.418 | N | 0.339 | neutral | None | None | None | None | I |
N/M | 0.2696 | likely_benign | 0.2773 | benign | 0.264 | Stabilizing | 0.94 | D | 0.321 | neutral | None | None | None | None | I |
N/P | 0.6466 | likely_pathogenic | 0.6396 | pathogenic | -0.039 | Destabilizing | 0.593 | D | 0.353 | neutral | None | None | None | None | I |
N/Q | 0.201 | likely_benign | 0.2102 | benign | -0.197 | Destabilizing | 0.418 | N | 0.217 | neutral | None | None | None | None | I |
N/R | 0.1815 | likely_benign | 0.1771 | benign | 0.01 | Stabilizing | 0.129 | N | 0.231 | neutral | None | None | None | None | I |
N/S | 0.0794 | likely_benign | 0.0809 | benign | -0.085 | Destabilizing | 0.101 | N | 0.253 | neutral | N | 0.440283569 | None | None | I |
N/T | 0.0891 | likely_benign | 0.0914 | benign | 0.04 | Stabilizing | 0.183 | N | 0.227 | neutral | N | 0.42856767 | None | None | I |
N/V | 0.1492 | likely_benign | 0.1472 | benign | -0.039 | Destabilizing | 0.593 | D | 0.341 | neutral | None | None | None | None | I |
N/W | 0.7108 | likely_pathogenic | 0.712 | pathogenic | -0.656 | Destabilizing | 0.983 | D | 0.335 | neutral | None | None | None | None | I |
N/Y | 0.1718 | likely_benign | 0.1635 | benign | -0.4 | Destabilizing | 0.213 | N | 0.368 | neutral | N | 0.482259984 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.