Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15922 | 47989;47990;47991 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
N2AB | 14281 | 43066;43067;43068 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
N2A | 13354 | 40285;40286;40287 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
N2B | 6857 | 20794;20795;20796 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
Novex-1 | 6982 | 21169;21170;21171 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
Novex-2 | 7049 | 21370;21371;21372 | chr2:178617231;178617230;178617229 | chr2:179481958;179481957;179481956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2057504712 | None | 0.201 | N | 0.263 | 0.169 | 0.225902525712 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs2057504360 | None | 0.379 | N | 0.369 | 0.385 | 0.38225645794 | gnomAD-4.0.0 | 2.1552E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.23497E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1096 | likely_benign | 0.1181 | benign | -0.494 | Destabilizing | 0.201 | N | 0.263 | neutral | N | 0.478272049 | None | None | N |
T/C | 0.4596 | ambiguous | 0.4801 | ambiguous | -0.37 | Destabilizing | 0.992 | D | 0.429 | neutral | None | None | None | None | N |
T/D | 0.3815 | ambiguous | 0.3999 | ambiguous | 0.32 | Stabilizing | 0.617 | D | 0.417 | neutral | None | None | None | None | N |
T/E | 0.3032 | likely_benign | 0.3144 | benign | 0.261 | Stabilizing | 0.617 | D | 0.363 | neutral | None | None | None | None | N |
T/F | 0.3133 | likely_benign | 0.3347 | benign | -0.922 | Destabilizing | 0.92 | D | 0.488 | neutral | None | None | None | None | N |
T/G | 0.2849 | likely_benign | 0.3233 | benign | -0.645 | Destabilizing | 0.617 | D | 0.381 | neutral | None | None | None | None | N |
T/H | 0.3037 | likely_benign | 0.3093 | benign | -0.879 | Destabilizing | 0.992 | D | 0.471 | neutral | None | None | None | None | N |
T/I | 0.2368 | likely_benign | 0.2465 | benign | -0.211 | Destabilizing | 0.379 | N | 0.369 | neutral | N | 0.516983981 | None | None | N |
T/K | 0.2011 | likely_benign | 0.1933 | benign | -0.368 | Destabilizing | 0.617 | D | 0.369 | neutral | None | None | None | None | N |
T/L | 0.1393 | likely_benign | 0.1474 | benign | -0.211 | Destabilizing | 0.25 | N | 0.35 | neutral | None | None | None | None | N |
T/M | 0.1218 | likely_benign | 0.1335 | benign | -0.066 | Destabilizing | 0.92 | D | 0.443 | neutral | None | None | None | None | N |
T/N | 0.1464 | likely_benign | 0.1589 | benign | -0.204 | Destabilizing | 0.549 | D | 0.339 | neutral | N | 0.48052044 | None | None | N |
T/P | 0.1491 | likely_benign | 0.1638 | benign | -0.276 | Destabilizing | 0.004 | N | 0.313 | neutral | N | 0.484446874 | None | None | N |
T/Q | 0.2555 | likely_benign | 0.2651 | benign | -0.403 | Destabilizing | 0.92 | D | 0.449 | neutral | None | None | None | None | N |
T/R | 0.1944 | likely_benign | 0.1765 | benign | -0.105 | Destabilizing | 0.92 | D | 0.449 | neutral | None | None | None | None | N |
T/S | 0.1252 | likely_benign | 0.139 | benign | -0.474 | Destabilizing | 0.02 | N | 0.135 | neutral | N | 0.436024465 | None | None | N |
T/V | 0.1774 | likely_benign | 0.1881 | benign | -0.276 | Destabilizing | 0.021 | N | 0.172 | neutral | None | None | None | None | N |
T/W | 0.6219 | likely_pathogenic | 0.6205 | pathogenic | -0.892 | Destabilizing | 0.992 | D | 0.553 | neutral | None | None | None | None | N |
T/Y | 0.3404 | ambiguous | 0.3589 | ambiguous | -0.616 | Destabilizing | 0.972 | D | 0.485 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.