Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15929 | 48010;48011;48012 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
N2AB | 14288 | 43087;43088;43089 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
N2A | 13361 | 40306;40307;40308 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
N2B | 6864 | 20815;20816;20817 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
Novex-1 | 6989 | 21190;21191;21192 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
Novex-2 | 7056 | 21391;21392;21393 | chr2:178617210;178617209;178617208 | chr2:179481937;179481936;179481935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1386533299 | 0.144 | 0.062 | N | 0.46 | 0.157 | 0.208816687407 | gnomAD-2.1.1 | 6.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 4.79E-05 | None | 0 | 0 | 0 |
K/E | rs1386533299 | 0.144 | 0.062 | N | 0.46 | 0.157 | 0.208816687407 | gnomAD-4.0.0 | 1.22659E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.14977E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2659 | likely_benign | 0.2813 | benign | -0.794 | Destabilizing | 0.035 | N | 0.462 | neutral | None | None | None | None | N |
K/C | 0.5081 | ambiguous | 0.5269 | ambiguous | -0.791 | Destabilizing | 0.935 | D | 0.638 | neutral | None | None | None | None | N |
K/D | 0.4946 | ambiguous | 0.4845 | ambiguous | -0.468 | Destabilizing | 0.081 | N | 0.523 | neutral | None | None | None | None | N |
K/E | 0.1743 | likely_benign | 0.1738 | benign | -0.327 | Destabilizing | 0.062 | N | 0.46 | neutral | N | 0.467803148 | None | None | N |
K/F | 0.7496 | likely_pathogenic | 0.7635 | pathogenic | -0.343 | Destabilizing | 0.555 | D | 0.647 | neutral | None | None | None | None | N |
K/G | 0.3748 | ambiguous | 0.3856 | ambiguous | -1.197 | Destabilizing | 0.081 | N | 0.525 | neutral | None | None | None | None | N |
K/H | 0.2815 | likely_benign | 0.2866 | benign | -1.541 | Destabilizing | 0.38 | N | 0.574 | neutral | None | None | None | None | N |
K/I | 0.2945 | likely_benign | 0.3089 | benign | 0.27 | Stabilizing | 0.188 | N | 0.629 | neutral | N | 0.475029999 | None | None | N |
K/L | 0.3466 | ambiguous | 0.356 | ambiguous | 0.27 | Stabilizing | 0.081 | N | 0.521 | neutral | None | None | None | None | N |
K/M | 0.217 | likely_benign | 0.2284 | benign | 0.145 | Stabilizing | 0.035 | N | 0.389 | neutral | None | None | None | None | N |
K/N | 0.3012 | likely_benign | 0.2932 | benign | -0.821 | Destabilizing | None | N | 0.208 | neutral | N | 0.477671558 | None | None | N |
K/P | 0.5783 | likely_pathogenic | 0.6148 | pathogenic | -0.055 | Destabilizing | 0.555 | D | 0.579 | neutral | None | None | None | None | N |
K/Q | 0.1218 | likely_benign | 0.1261 | benign | -0.835 | Destabilizing | 0.317 | N | 0.52 | neutral | N | 0.482789225 | None | None | N |
K/R | 0.0872 | likely_benign | 0.0864 | benign | -0.87 | Destabilizing | 0.117 | N | 0.496 | neutral | N | 0.478344124 | None | None | N |
K/S | 0.2604 | likely_benign | 0.2549 | benign | -1.461 | Destabilizing | 0.002 | N | 0.117 | neutral | None | None | None | None | N |
K/T | 0.1136 | likely_benign | 0.1141 | benign | -1.104 | Destabilizing | 0.062 | N | 0.473 | neutral | N | 0.477365578 | None | None | N |
K/V | 0.2597 | likely_benign | 0.2722 | benign | -0.055 | Destabilizing | 0.081 | N | 0.589 | neutral | None | None | None | None | N |
K/W | 0.7481 | likely_pathogenic | 0.7466 | pathogenic | -0.231 | Destabilizing | 0.935 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/Y | 0.5598 | ambiguous | 0.5576 | ambiguous | 0.055 | Stabilizing | 0.791 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.