Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15935 | 48028;48029;48030 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
N2AB | 14294 | 43105;43106;43107 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
N2A | 13367 | 40324;40325;40326 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
N2B | 6870 | 20833;20834;20835 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
Novex-1 | 6995 | 21208;21209;21210 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
Novex-2 | 7062 | 21409;21410;21411 | chr2:178617192;178617191;178617190 | chr2:179481919;179481918;179481917 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.811 | N | 0.569 | 0.1 | 0.16115917748 | gnomAD-4.0.0 | 6.99974E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.22127E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1181 | likely_benign | 0.1155 | benign | -1.472 | Destabilizing | 0.48 | N | 0.462 | neutral | N | 0.462716778 | None | None | N |
S/C | 0.0757 | likely_benign | 0.0633 | benign | -1.266 | Destabilizing | 0.036 | N | 0.623 | neutral | N | 0.471592597 | None | None | N |
S/D | 0.8461 | likely_pathogenic | 0.8363 | pathogenic | -2.206 | Highly Destabilizing | 0.932 | D | 0.662 | neutral | None | None | None | None | N |
S/E | 0.7798 | likely_pathogenic | 0.7551 | pathogenic | -2.002 | Highly Destabilizing | 0.872 | D | 0.662 | neutral | None | None | None | None | N |
S/F | 0.2133 | likely_benign | 0.2017 | benign | -1.124 | Destabilizing | 0.007 | N | 0.505 | neutral | N | 0.466178421 | None | None | N |
S/G | 0.2218 | likely_benign | 0.2115 | benign | -1.805 | Destabilizing | 0.85 | D | 0.581 | neutral | None | None | None | None | N |
S/H | 0.4368 | ambiguous | 0.3897 | ambiguous | -1.873 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/I | 0.2004 | likely_benign | 0.2104 | benign | -0.615 | Destabilizing | 0.083 | N | 0.645 | neutral | None | None | None | None | N |
S/K | 0.7316 | likely_pathogenic | 0.6806 | pathogenic | -0.796 | Destabilizing | 0.773 | D | 0.636 | neutral | None | None | None | None | N |
S/L | 0.1321 | likely_benign | 0.1324 | benign | -0.615 | Destabilizing | 0.584 | D | 0.698 | prob.neutral | None | None | None | None | N |
S/M | 0.1896 | likely_benign | 0.1946 | benign | -0.908 | Destabilizing | 0.98 | D | 0.711 | prob.delet. | None | None | None | None | N |
S/N | 0.3664 | ambiguous | 0.3602 | ambiguous | -1.42 | Destabilizing | 0.932 | D | 0.669 | neutral | None | None | None | None | N |
S/P | 0.9871 | likely_pathogenic | 0.985 | pathogenic | -0.873 | Destabilizing | 0.991 | D | 0.733 | prob.delet. | D | 0.6100278 | None | None | N |
S/Q | 0.5909 | likely_pathogenic | 0.5471 | ambiguous | -1.175 | Destabilizing | 0.96 | D | 0.71 | prob.delet. | None | None | None | None | N |
S/R | 0.5643 | likely_pathogenic | 0.4928 | ambiguous | -1.047 | Destabilizing | 0.021 | N | 0.615 | neutral | None | None | None | None | N |
S/T | 0.123 | likely_benign | 0.1251 | benign | -1.096 | Destabilizing | 0.811 | D | 0.569 | neutral | N | 0.472369536 | None | None | N |
S/V | 0.2289 | likely_benign | 0.2405 | benign | -0.873 | Destabilizing | 0.584 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/W | 0.3877 | ambiguous | 0.3456 | ambiguous | -1.394 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
S/Y | 0.211 | likely_benign | 0.1856 | benign | -1.016 | Destabilizing | 0.719 | D | 0.713 | prob.delet. | N | 0.465115061 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.