Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15952 | 48079;48080;48081 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
N2AB | 14311 | 43156;43157;43158 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
N2A | 13384 | 40375;40376;40377 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
N2B | 6887 | 20884;20885;20886 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
Novex-1 | 7012 | 21259;21260;21261 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
Novex-2 | 7079 | 21460;21461;21462 | chr2:178617141;178617140;178617139 | chr2:179481868;179481867;179481866 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | D | 0.876 | 0.437 | 0.731863806485 | gnomAD-4.0.0 | 1.20046E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07607E-05 | 0 |
L/V | rs2057492461 | None | 0.429 | N | 0.347 | 0.114 | 0.18995819373 | gnomAD-4.0.0 | 1.37272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80263E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4644 | ambiguous | 0.4614 | ambiguous | -2.355 | Highly Destabilizing | 0.987 | D | 0.691 | prob.delet. | None | None | None | None | N |
L/C | 0.5802 | likely_pathogenic | 0.5875 | pathogenic | -1.45 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/D | 0.9076 | likely_pathogenic | 0.9112 | pathogenic | -2.384 | Highly Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
L/E | 0.5511 | ambiguous | 0.5548 | ambiguous | -2.208 | Highly Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
L/F | 0.2445 | likely_benign | 0.2251 | benign | -1.409 | Destabilizing | 0.998 | D | 0.811 | deleterious | N | 0.477689691 | None | None | N |
L/G | 0.8415 | likely_pathogenic | 0.8432 | pathogenic | -2.851 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/H | 0.4559 | ambiguous | 0.4455 | ambiguous | -2.136 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | N | 0.436068506 | None | None | N |
L/I | 0.097 | likely_benign | 0.098 | benign | -0.952 | Destabilizing | 0.966 | D | 0.647 | neutral | N | 0.432701484 | None | None | N |
L/K | 0.4207 | ambiguous | 0.4238 | ambiguous | -1.875 | Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/M | 0.1371 | likely_benign | 0.138 | benign | -0.717 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
L/N | 0.7062 | likely_pathogenic | 0.7063 | pathogenic | -2.056 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/P | 0.9302 | likely_pathogenic | 0.9271 | pathogenic | -1.397 | Destabilizing | 0.999 | D | 0.876 | deleterious | D | 0.523165899 | None | None | N |
L/Q | 0.2747 | likely_benign | 0.2731 | benign | -2.009 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
L/R | 0.3747 | ambiguous | 0.3671 | ambiguous | -1.435 | Destabilizing | 0.999 | D | 0.896 | deleterious | N | 0.515912859 | None | None | N |
L/S | 0.5971 | likely_pathogenic | 0.5963 | pathogenic | -2.74 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
L/T | 0.4167 | ambiguous | 0.4317 | ambiguous | -2.428 | Highly Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
L/V | 0.0913 | likely_benign | 0.0955 | benign | -1.397 | Destabilizing | 0.429 | N | 0.347 | neutral | N | 0.420447931 | None | None | N |
L/W | 0.5891 | likely_pathogenic | 0.5617 | ambiguous | -1.736 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
L/Y | 0.5767 | likely_pathogenic | 0.5504 | ambiguous | -1.452 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.