Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15973 | 48142;48143;48144 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
N2AB | 14332 | 43219;43220;43221 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
N2A | 13405 | 40438;40439;40440 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
N2B | 6908 | 20947;20948;20949 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
Novex-1 | 7033 | 21322;21323;21324 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
Novex-2 | 7100 | 21523;21524;21525 | chr2:178616972;178616971;178616970 | chr2:179481699;179481698;179481697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs375099780 | 0.713 | 0.998 | N | 0.557 | 0.338 | None | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | I | None | 2.48303E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs375099780 | 0.713 | 0.998 | N | 0.557 | 0.338 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.67E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs375099780 | 0.713 | 0.998 | N | 0.557 | 0.338 | None | gnomAD-4.0.0 | 5.58146E-06 | None | None | None | None | I | None | 1.20376E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5575 | ambiguous | 0.544 | ambiguous | -0.584 | Destabilizing | 0.989 | D | 0.521 | neutral | N | 0.469300847 | None | None | I |
E/C | 0.9576 | likely_pathogenic | 0.9617 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/D | 0.5368 | ambiguous | 0.5714 | pathogenic | -0.619 | Destabilizing | 0.998 | D | 0.473 | neutral | N | 0.442736064 | None | None | I |
E/F | 0.9745 | likely_pathogenic | 0.9732 | pathogenic | -0.153 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | I |
E/G | 0.7879 | likely_pathogenic | 0.7875 | pathogenic | -0.849 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.51211362 | None | None | I |
E/H | 0.865 | likely_pathogenic | 0.8726 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
E/I | 0.75 | likely_pathogenic | 0.7262 | pathogenic | 0.108 | Stabilizing | 0.995 | D | 0.615 | neutral | None | None | None | None | I |
E/K | 0.6378 | likely_pathogenic | 0.6359 | pathogenic | 0.078 | Stabilizing | 0.998 | D | 0.557 | neutral | N | 0.449729639 | None | None | I |
E/L | 0.8382 | likely_pathogenic | 0.8297 | pathogenic | 0.108 | Stabilizing | 0.983 | D | 0.601 | neutral | None | None | None | None | I |
E/M | 0.8276 | likely_pathogenic | 0.8121 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | I |
E/N | 0.747 | likely_pathogenic | 0.7512 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/P | 0.9391 | likely_pathogenic | 0.9441 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | I |
E/Q | 0.401 | ambiguous | 0.3977 | ambiguous | -0.394 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.44127226 | None | None | I |
E/R | 0.7495 | likely_pathogenic | 0.7512 | pathogenic | 0.404 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/S | 0.631 | likely_pathogenic | 0.6325 | pathogenic | -0.638 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | I |
E/T | 0.5168 | ambiguous | 0.511 | ambiguous | -0.412 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
E/V | 0.4832 | ambiguous | 0.4633 | ambiguous | -0.102 | Destabilizing | 0.733 | D | 0.385 | neutral | N | 0.446411319 | None | None | I |
E/W | 0.9883 | likely_pathogenic | 0.9893 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
E/Y | 0.942 | likely_pathogenic | 0.9434 | pathogenic | 0.115 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.