Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16019 | 48280;48281;48282 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
N2AB | 14378 | 43357;43358;43359 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
N2A | 13451 | 40576;40577;40578 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
N2B | 6954 | 21085;21086;21087 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
Novex-1 | 7079 | 21460;21461;21462 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
Novex-2 | 7146 | 21661;21662;21663 | chr2:178616834;178616833;178616832 | chr2:179481561;179481560;179481559 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.977 | D | 0.559 | 0.442 | 0.509820907775 | gnomAD-4.0.0 | 3.18685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72413E-06 | 0 | 0 |
E/K | rs758399903 | -1.281 | 0.992 | N | 0.517 | 0.291 | 0.45563089846 | gnomAD-2.1.1 | 4.85E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.61E-05 | None | 2.28818E-04 | None | 0 | 2.69E-05 | 0 |
E/K | rs758399903 | -1.281 | 0.992 | N | 0.517 | 0.291 | 0.45563089846 | gnomAD-3.1.2 | 1.98E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 2.07641E-04 | 0 |
E/K | rs758399903 | -1.281 | 0.992 | N | 0.517 | 0.291 | 0.45563089846 | gnomAD-4.0.0 | 2.29462E-05 | None | None | None | None | N | None | 1.33761E-05 | 1.66978E-05 | None | 0 | 2.23724E-05 | None | 0 | 0 | 1.27207E-05 | 1.97707E-04 | 1.60282E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2841 | likely_benign | 0.3143 | benign | -0.439 | Destabilizing | 0.977 | D | 0.559 | neutral | D | 0.549141635 | None | None | N |
E/C | 0.9073 | likely_pathogenic | 0.9165 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
E/D | 0.5171 | ambiguous | 0.5757 | pathogenic | -1.525 | Destabilizing | 0.977 | D | 0.501 | neutral | D | 0.593252562 | None | None | N |
E/F | 0.9062 | likely_pathogenic | 0.9112 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
E/G | 0.4037 | ambiguous | 0.4428 | ambiguous | -0.921 | Destabilizing | 0.993 | D | 0.715 | prob.delet. | N | 0.502298605 | None | None | N |
E/H | 0.5949 | likely_pathogenic | 0.6395 | pathogenic | -0.097 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
E/I | 0.6555 | likely_pathogenic | 0.6735 | pathogenic | 0.914 | Stabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
E/K | 0.2191 | likely_benign | 0.26 | benign | -0.678 | Destabilizing | 0.992 | D | 0.517 | neutral | N | 0.50668599 | None | None | N |
E/L | 0.6841 | likely_pathogenic | 0.7054 | pathogenic | 0.914 | Stabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
E/M | 0.6404 | likely_pathogenic | 0.663 | pathogenic | 1.485 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
E/N | 0.5734 | likely_pathogenic | 0.6357 | pathogenic | -1.261 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/P | 0.985 | likely_pathogenic | 0.986 | pathogenic | 0.485 | Stabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
E/Q | 0.1653 | likely_benign | 0.1801 | benign | -0.917 | Destabilizing | 0.77 | D | 0.309 | neutral | N | 0.506089358 | None | None | N |
E/R | 0.378 | ambiguous | 0.4251 | ambiguous | -0.599 | Destabilizing | 0.99 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/S | 0.3144 | likely_benign | 0.3515 | ambiguous | -1.755 | Destabilizing | 0.983 | D | 0.573 | neutral | None | None | None | None | N |
E/T | 0.4013 | ambiguous | 0.4321 | ambiguous | -1.316 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/V | 0.4346 | ambiguous | 0.4599 | ambiguous | 0.485 | Stabilizing | 0.997 | D | 0.782 | deleterious | N | 0.512590353 | None | None | N |
E/W | 0.9672 | likely_pathogenic | 0.9699 | pathogenic | 0.171 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
E/Y | 0.8209 | likely_pathogenic | 0.8409 | pathogenic | 0.431 | Stabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.