Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1604 | 5035;5036;5037 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
N2AB | 1604 | 5035;5036;5037 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
N2A | 1604 | 5035;5036;5037 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
N2B | 1558 | 4897;4898;4899 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
Novex-1 | 1558 | 4897;4898;4899 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
Novex-2 | 1558 | 4897;4898;4899 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
Novex-3 | 1604 | 5035;5036;5037 | chr2:178777153;178777152;178777151 | chr2:179641880;179641879;179641878 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1382643483 | -1.584 | 0.219 | N | 0.164 | 0.185 | 0.541015953236 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1382643483 | -1.584 | 0.219 | N | 0.164 | 0.185 | 0.541015953236 | gnomAD-4.0.0 | 1.59075E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9236 | likely_pathogenic | 0.8791 | pathogenic | -2.414 | Highly Destabilizing | 0.985 | D | 0.598 | neutral | None | None | None | None | N |
I/C | 0.9219 | likely_pathogenic | 0.8894 | pathogenic | -1.717 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/D | 0.995 | likely_pathogenic | 0.991 | pathogenic | -2.876 | Highly Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
I/E | 0.9846 | likely_pathogenic | 0.9735 | pathogenic | -2.643 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
I/F | 0.3227 | likely_benign | 0.292 | benign | -1.415 | Destabilizing | 0.994 | D | 0.661 | neutral | N | 0.505596981 | None | None | N |
I/G | 0.982 | likely_pathogenic | 0.9696 | pathogenic | -2.958 | Highly Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
I/H | 0.9603 | likely_pathogenic | 0.9415 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
I/K | 0.9731 | likely_pathogenic | 0.9583 | pathogenic | -2.072 | Highly Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
I/L | 0.2728 | likely_benign | 0.2406 | benign | -0.845 | Destabilizing | 0.817 | D | 0.351 | neutral | N | 0.503373505 | None | None | N |
I/M | 0.2064 | likely_benign | 0.1761 | benign | -0.768 | Destabilizing | 0.911 | D | 0.374 | neutral | D | 0.567178943 | None | None | N |
I/N | 0.9042 | likely_pathogenic | 0.8587 | pathogenic | -2.431 | Highly Destabilizing | 0.999 | D | 0.826 | deleterious | D | 0.676867863 | None | None | N |
I/P | 0.9936 | likely_pathogenic | 0.9901 | pathogenic | -1.349 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
I/Q | 0.9661 | likely_pathogenic | 0.9472 | pathogenic | -2.282 | Highly Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
I/R | 0.9556 | likely_pathogenic | 0.9345 | pathogenic | -1.804 | Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | N |
I/S | 0.9283 | likely_pathogenic | 0.8846 | pathogenic | -3.075 | Highly Destabilizing | 0.997 | D | 0.738 | prob.delet. | D | 0.547590697 | None | None | N |
I/T | 0.8878 | likely_pathogenic | 0.8204 | pathogenic | -2.693 | Highly Destabilizing | 0.98 | D | 0.658 | neutral | D | 0.546292518 | None | None | N |
I/V | 0.1804 | likely_benign | 0.1591 | benign | -1.349 | Destabilizing | 0.219 | N | 0.164 | neutral | N | 0.490716192 | None | None | N |
I/W | 0.9396 | likely_pathogenic | 0.9221 | pathogenic | -1.826 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.7605 | likely_pathogenic | 0.7185 | pathogenic | -1.503 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.