Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1605 | 5038;5039;5040 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
N2AB | 1605 | 5038;5039;5040 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
N2A | 1605 | 5038;5039;5040 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
N2B | 1559 | 4900;4901;4902 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
Novex-1 | 1559 | 4900;4901;4902 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
Novex-2 | 1559 | 4900;4901;4902 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
Novex-3 | 1605 | 5038;5039;5040 | chr2:178777150;178777149;178777049 | chr2:179641877;179641876;179641776 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.324 | N | 0.507 | 0.29 | 0.490839437361 | gnomAD-4.0.0 | 6.8411E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99332E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3529 | ambiguous | 0.3186 | benign | -0.327 | Destabilizing | 0.116 | N | 0.428 | neutral | None | None | None | None | N |
R/C | 0.1893 | likely_benign | 0.1702 | benign | -0.281 | Destabilizing | 0.981 | D | 0.536 | neutral | None | None | None | None | N |
R/D | 0.7276 | likely_pathogenic | 0.6674 | pathogenic | 0.066 | Stabilizing | 0.388 | N | 0.547 | neutral | None | None | None | None | N |
R/E | 0.3798 | ambiguous | 0.3275 | benign | 0.181 | Stabilizing | 0.116 | N | 0.408 | neutral | None | None | None | None | N |
R/F | 0.4955 | ambiguous | 0.4538 | ambiguous | -0.205 | Destabilizing | 0.69 | D | 0.563 | neutral | None | None | None | None | N |
R/G | 0.3005 | likely_benign | 0.2646 | benign | -0.626 | Destabilizing | 0.324 | N | 0.507 | neutral | N | 0.50832044 | None | None | N |
R/H | 0.1014 | likely_benign | 0.0975 | benign | -1.074 | Destabilizing | 0.818 | D | 0.483 | neutral | None | None | None | None | N |
R/I | 0.2012 | likely_benign | 0.1894 | benign | 0.459 | Stabilizing | 0.001 | N | 0.36 | neutral | N | 0.513550498 | None | None | N |
R/K | 0.0859 | likely_benign | 0.0851 | benign | -0.391 | Destabilizing | None | N | 0.109 | neutral | N | 0.459842192 | None | None | N |
R/L | 0.2389 | likely_benign | 0.2216 | benign | 0.459 | Stabilizing | 0.116 | N | 0.434 | neutral | None | None | None | None | N |
R/M | 0.2221 | likely_benign | 0.2022 | benign | 0.026 | Stabilizing | 0.69 | D | 0.529 | neutral | None | None | None | None | N |
R/N | 0.5102 | ambiguous | 0.4685 | ambiguous | 0.076 | Stabilizing | 0.388 | N | 0.455 | neutral | None | None | None | None | N |
R/P | 0.9389 | likely_pathogenic | 0.9113 | pathogenic | 0.219 | Stabilizing | 0.818 | D | 0.543 | neutral | None | None | None | None | N |
R/Q | 0.1014 | likely_benign | 0.0964 | benign | -0.038 | Destabilizing | 0.241 | N | 0.468 | neutral | None | None | None | None | N |
R/S | 0.4068 | ambiguous | 0.3701 | ambiguous | -0.507 | Destabilizing | 0.193 | N | 0.471 | neutral | N | 0.481867867 | None | None | N |
R/T | 0.1937 | likely_benign | 0.1751 | benign | -0.218 | Destabilizing | 0.324 | N | 0.481 | neutral | N | 0.496188431 | None | None | N |
R/V | 0.2691 | likely_benign | 0.2465 | benign | 0.219 | Stabilizing | 0.098 | N | 0.499 | neutral | None | None | None | None | N |
R/W | 0.2036 | likely_benign | 0.1819 | benign | 0.003 | Stabilizing | 0.981 | D | 0.577 | neutral | None | None | None | None | N |
R/Y | 0.4117 | ambiguous | 0.3746 | ambiguous | 0.332 | Stabilizing | 0.818 | D | 0.561 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.