Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16065 | 48418;48419;48420 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
N2AB | 14424 | 43495;43496;43497 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
N2A | 13497 | 40714;40715;40716 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
N2B | 7000 | 21223;21224;21225 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
Novex-1 | 7125 | 21598;21599;21600 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
Novex-2 | 7192 | 21799;21800;21801 | chr2:178616598;178616597;178616596 | chr2:179481325;179481324;179481323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1490446261 | -0.427 | None | N | 0.257 | 0.048 | 0.0297737177859 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0804 | likely_benign | 0.0809 | benign | -0.489 | Destabilizing | None | N | 0.061 | neutral | N | 0.417374205 | None | None | N |
G/C | 0.107 | likely_benign | 0.106 | benign | -0.731 | Destabilizing | 0.295 | N | 0.413 | neutral | N | 0.473589396 | None | None | N |
G/D | 0.205 | likely_benign | 0.2012 | benign | -0.975 | Destabilizing | None | N | 0.257 | neutral | N | 0.44478098 | None | None | N |
G/E | 0.1729 | likely_benign | 0.1728 | benign | -1.072 | Destabilizing | 0.016 | N | 0.447 | neutral | None | None | None | None | N |
G/F | 0.3297 | likely_benign | 0.3686 | ambiguous | -0.961 | Destabilizing | 0.214 | N | 0.497 | neutral | None | None | None | None | N |
G/H | 0.2135 | likely_benign | 0.2331 | benign | -1.063 | Destabilizing | 0.356 | N | 0.403 | neutral | None | None | None | None | N |
G/I | 0.1265 | likely_benign | 0.1322 | benign | -0.29 | Destabilizing | 0.038 | N | 0.472 | neutral | None | None | None | None | N |
G/K | 0.2569 | likely_benign | 0.2739 | benign | -1.185 | Destabilizing | 0.038 | N | 0.419 | neutral | None | None | None | None | N |
G/L | 0.1765 | likely_benign | 0.1983 | benign | -0.29 | Destabilizing | None | N | 0.321 | neutral | None | None | None | None | N |
G/M | 0.2098 | likely_benign | 0.2316 | benign | -0.29 | Destabilizing | 0.214 | N | 0.444 | neutral | None | None | None | None | N |
G/N | 0.171 | likely_benign | 0.1868 | benign | -0.751 | Destabilizing | 0.038 | N | 0.281 | neutral | None | None | None | None | N |
G/P | 0.7516 | likely_pathogenic | 0.7815 | pathogenic | -0.317 | Destabilizing | 0.072 | N | 0.466 | neutral | None | None | None | None | N |
G/Q | 0.1937 | likely_benign | 0.2032 | benign | -0.965 | Destabilizing | 0.214 | N | 0.495 | neutral | None | None | None | None | N |
G/R | 0.1862 | likely_benign | 0.1877 | benign | -0.802 | Destabilizing | 0.055 | N | 0.471 | neutral | N | 0.459962771 | None | None | N |
G/S | 0.0728 | likely_benign | 0.0717 | benign | -0.913 | Destabilizing | None | N | 0.083 | neutral | N | 0.353381643 | None | None | N |
G/T | 0.0733 | likely_benign | 0.0771 | benign | -0.937 | Destabilizing | None | N | 0.246 | neutral | None | None | None | None | N |
G/V | 0.0974 | likely_benign | 0.0995 | benign | -0.317 | Destabilizing | 0.012 | N | 0.415 | neutral | N | 0.404613997 | None | None | N |
G/W | 0.2784 | likely_benign | 0.2913 | benign | -1.279 | Destabilizing | 0.864 | D | 0.419 | neutral | None | None | None | None | N |
G/Y | 0.2732 | likely_benign | 0.293 | benign | -0.88 | Destabilizing | 0.356 | N | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.