Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16081 | 48466;48467;48468 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
N2AB | 14440 | 43543;43544;43545 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
N2A | 13513 | 40762;40763;40764 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
N2B | 7016 | 21271;21272;21273 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
Novex-1 | 7141 | 21646;21647;21648 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
Novex-2 | 7208 | 21847;21848;21849 | chr2:178616550;178616549;178616548 | chr2:179481277;179481276;179481275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.27 | D | 0.353 | 0.28 | 0.276898752692 | gnomAD-4.0.0 | 1.59394E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86352E-06 | 0 | 0 |
D/N | None | None | 0.002 | N | 0.059 | 0.1 | 0.184867976434 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3549 | ambiguous | 0.4859 | ambiguous | -0.226 | Destabilizing | 0.27 | N | 0.356 | neutral | N | 0.461720439 | None | None | N |
D/C | 0.6175 | likely_pathogenic | 0.7767 | pathogenic | 0.36 | Stabilizing | 0.995 | D | 0.345 | neutral | None | None | None | None | N |
D/E | 0.3283 | likely_benign | 0.4246 | ambiguous | -0.32 | Destabilizing | 0.27 | N | 0.245 | neutral | N | 0.468683109 | None | None | N |
D/F | 0.5843 | likely_pathogenic | 0.7065 | pathogenic | -0.514 | Destabilizing | 0.944 | D | 0.399 | neutral | None | None | None | None | N |
D/G | 0.3938 | ambiguous | 0.5199 | ambiguous | -0.393 | Destabilizing | 0.27 | N | 0.353 | neutral | D | 0.530333355 | None | None | N |
D/H | 0.2559 | likely_benign | 0.4089 | ambiguous | -0.597 | Destabilizing | 0.002 | N | 0.109 | neutral | N | 0.479234529 | None | None | N |
D/I | 0.4577 | ambiguous | 0.5925 | pathogenic | 0.156 | Stabilizing | 0.944 | D | 0.422 | neutral | None | None | None | None | N |
D/K | 0.5764 | likely_pathogenic | 0.7211 | pathogenic | 0.425 | Stabilizing | 0.003 | N | 0.124 | neutral | None | None | None | None | N |
D/L | 0.5092 | ambiguous | 0.63 | pathogenic | 0.156 | Stabilizing | 0.704 | D | 0.459 | neutral | None | None | None | None | N |
D/M | 0.71 | likely_pathogenic | 0.8012 | pathogenic | 0.513 | Stabilizing | 0.981 | D | 0.36 | neutral | None | None | None | None | N |
D/N | 0.1054 | likely_benign | 0.1334 | benign | 0.28 | Stabilizing | 0.002 | N | 0.059 | neutral | N | 0.469296325 | None | None | N |
D/P | 0.9537 | likely_pathogenic | 0.9746 | pathogenic | 0.05 | Stabilizing | 0.828 | D | 0.402 | neutral | None | None | None | None | N |
D/Q | 0.5346 | ambiguous | 0.6838 | pathogenic | 0.282 | Stabilizing | 0.704 | D | 0.236 | neutral | None | None | None | None | N |
D/R | 0.5896 | likely_pathogenic | 0.724 | pathogenic | 0.352 | Stabilizing | 0.543 | D | 0.441 | neutral | None | None | None | None | N |
D/S | 0.1989 | likely_benign | 0.2704 | benign | 0.189 | Stabilizing | 0.037 | N | 0.067 | neutral | None | None | None | None | N |
D/T | 0.3613 | ambiguous | 0.4832 | ambiguous | 0.314 | Stabilizing | 0.329 | N | 0.341 | neutral | None | None | None | None | N |
D/V | 0.3304 | likely_benign | 0.4471 | ambiguous | 0.05 | Stabilizing | 0.784 | D | 0.471 | neutral | N | 0.499826492 | None | None | N |
D/W | 0.8999 | likely_pathogenic | 0.939 | pathogenic | -0.496 | Destabilizing | 0.995 | D | 0.368 | neutral | None | None | None | None | N |
D/Y | 0.2238 | likely_benign | 0.3369 | benign | -0.305 | Destabilizing | 0.863 | D | 0.441 | neutral | N | 0.470505953 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.