Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16092 | 48499;48500;48501 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
N2AB | 14451 | 43576;43577;43578 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
N2A | 13524 | 40795;40796;40797 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
N2B | 7027 | 21304;21305;21306 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
Novex-1 | 7152 | 21679;21680;21681 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
Novex-2 | 7219 | 21880;21881;21882 | chr2:178616517;178616516;178616515 | chr2:179481244;179481243;179481242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.215 | 0.038 | 0.199424873507 | gnomAD-4.0.0 | 3.18841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72912E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7356 | likely_pathogenic | 0.7223 | pathogenic | -2.686 | Highly Destabilizing | 0.334 | N | 0.607 | neutral | D | 0.70542067 | None | None | N |
V/C | 0.9363 | likely_pathogenic | 0.9362 | pathogenic | -2.141 | Highly Destabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | N |
V/D | 0.9968 | likely_pathogenic | 0.9939 | pathogenic | -3.655 | Highly Destabilizing | 0.781 | D | 0.904 | deleterious | D | 0.765805413 | None | None | N |
V/E | 0.9881 | likely_pathogenic | 0.9817 | pathogenic | -3.326 | Highly Destabilizing | 0.826 | D | 0.881 | deleterious | None | None | None | None | N |
V/F | 0.7311 | likely_pathogenic | 0.6562 | pathogenic | -1.585 | Destabilizing | 0.638 | D | 0.779 | deleterious | D | 0.728751676 | None | None | N |
V/G | 0.9189 | likely_pathogenic | 0.9007 | pathogenic | -3.285 | Highly Destabilizing | 0.781 | D | 0.895 | deleterious | D | 0.765805413 | None | None | N |
V/H | 0.9962 | likely_pathogenic | 0.9942 | pathogenic | -3.13 | Highly Destabilizing | 0.982 | D | 0.867 | deleterious | None | None | None | None | N |
V/I | 0.0693 | likely_benign | 0.0654 | benign | -0.913 | Destabilizing | 0.001 | N | 0.215 | neutral | N | 0.460634674 | None | None | N |
V/K | 0.9907 | likely_pathogenic | 0.9855 | pathogenic | -2.286 | Highly Destabilizing | 0.826 | D | 0.882 | deleterious | None | None | None | None | N |
V/L | 0.2713 | likely_benign | 0.2767 | benign | -0.913 | Destabilizing | 0.034 | N | 0.465 | neutral | N | 0.500209573 | None | None | N |
V/M | 0.4571 | ambiguous | 0.4384 | ambiguous | -1.226 | Destabilizing | 0.7 | D | 0.673 | neutral | None | None | None | None | N |
V/N | 0.9901 | likely_pathogenic | 0.9832 | pathogenic | -3.046 | Highly Destabilizing | 0.935 | D | 0.905 | deleterious | None | None | None | None | N |
V/P | 0.9824 | likely_pathogenic | 0.9678 | pathogenic | -1.491 | Destabilizing | 0.935 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.9866 | likely_pathogenic | 0.9811 | pathogenic | -2.659 | Highly Destabilizing | 0.935 | D | 0.901 | deleterious | None | None | None | None | N |
V/R | 0.9822 | likely_pathogenic | 0.9729 | pathogenic | -2.375 | Highly Destabilizing | 0.826 | D | 0.906 | deleterious | None | None | None | None | N |
V/S | 0.9552 | likely_pathogenic | 0.9411 | pathogenic | -3.509 | Highly Destabilizing | 0.826 | D | 0.865 | deleterious | None | None | None | None | N |
V/T | 0.8118 | likely_pathogenic | 0.7911 | pathogenic | -3.022 | Highly Destabilizing | 0.399 | N | 0.647 | neutral | None | None | None | None | N |
V/W | 0.9935 | likely_pathogenic | 0.989 | pathogenic | -2.097 | Highly Destabilizing | 0.982 | D | 0.834 | deleterious | None | None | None | None | N |
V/Y | 0.9805 | likely_pathogenic | 0.9676 | pathogenic | -1.877 | Destabilizing | 0.826 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.