Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16101 | 48526;48527;48528 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
N2AB | 14460 | 43603;43604;43605 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
N2A | 13533 | 40822;40823;40824 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
N2B | 7036 | 21331;21332;21333 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
Novex-1 | 7161 | 21706;21707;21708 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
Novex-2 | 7228 | 21907;21908;21909 | chr2:178616490;178616489;178616488 | chr2:179481217;179481216;179481215 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.987 | D | 0.501 | 0.362 | 0.41859458845 | gnomAD-4.0.0 | 1.59478E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88303E-05 | 0 | 0 | 0 | 0 |
T/S | rs1450802850 | -0.306 | 0.989 | N | 0.445 | 0.139 | 0.163833314356 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/S | rs1450802850 | -0.306 | 0.989 | N | 0.445 | 0.139 | 0.163833314356 | gnomAD-4.0.0 | 1.59473E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43443E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1081 | likely_benign | 0.1218 | benign | -0.46 | Destabilizing | 0.977 | D | 0.441 | neutral | N | 0.470132343 | None | None | N |
T/C | 0.6148 | likely_pathogenic | 0.6568 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.561 | neutral | None | None | None | None | N |
T/D | 0.7349 | likely_pathogenic | 0.7586 | pathogenic | 0.299 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
T/E | 0.6374 | likely_pathogenic | 0.6583 | pathogenic | 0.246 | Stabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
T/F | 0.465 | ambiguous | 0.489 | ambiguous | -0.82 | Destabilizing | 0.995 | D | 0.605 | neutral | None | None | None | None | N |
T/G | 0.2979 | likely_benign | 0.3222 | benign | -0.622 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
T/H | 0.4876 | ambiguous | 0.5274 | ambiguous | -0.788 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
T/I | 0.337 | likely_benign | 0.3689 | ambiguous | -0.146 | Destabilizing | 0.987 | D | 0.501 | neutral | D | 0.570140111 | None | None | N |
T/K | 0.4936 | ambiguous | 0.518 | ambiguous | -0.416 | Destabilizing | 0.993 | D | 0.516 | neutral | N | 0.464062798 | None | None | N |
T/L | 0.1867 | likely_benign | 0.206 | benign | -0.146 | Destabilizing | 0.906 | D | 0.468 | neutral | None | None | None | None | N |
T/M | 0.1229 | likely_benign | 0.1356 | benign | -0.123 | Destabilizing | 0.921 | D | 0.44 | neutral | None | None | None | None | N |
T/N | 0.193 | likely_benign | 0.2224 | benign | -0.214 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | N |
T/P | 0.3589 | ambiguous | 0.3784 | ambiguous | -0.221 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.507090179 | None | None | N |
T/Q | 0.406 | ambiguous | 0.4246 | ambiguous | -0.389 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | N |
T/R | 0.4367 | ambiguous | 0.455 | ambiguous | -0.134 | Destabilizing | 0.997 | D | 0.512 | neutral | N | 0.477165509 | None | None | N |
T/S | 0.1514 | likely_benign | 0.1737 | benign | -0.468 | Destabilizing | 0.989 | D | 0.445 | neutral | N | 0.472578312 | None | None | N |
T/V | 0.2343 | likely_benign | 0.26 | benign | -0.221 | Destabilizing | 0.966 | D | 0.447 | neutral | None | None | None | None | N |
T/W | 0.8338 | likely_pathogenic | 0.8335 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
T/Y | 0.501 | ambiguous | 0.5164 | ambiguous | -0.549 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.