Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16113 | 48562;48563;48564 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
N2AB | 14472 | 43639;43640;43641 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
N2A | 13545 | 40858;40859;40860 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
N2B | 7048 | 21367;21368;21369 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
Novex-1 | 7173 | 21742;21743;21744 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
Novex-2 | 7240 | 21943;21944;21945 | chr2:178615764;178615763;178615762 | chr2:179480491;179480490;179480489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.471 | 0.27 | 0.187945064343 | gnomAD-4.0.0 | 1.59558E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43542E-05 | 0 |
E/K | rs548275593 | -0.524 | 0.999 | N | 0.591 | 0.402 | 0.352693368174 | gnomAD-2.1.1 | 6.86E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 5.57304E-04 | None | 0 | 0 | 0 |
E/K | rs548275593 | -0.524 | 0.999 | N | 0.591 | 0.402 | 0.352693368174 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 8.285E-04 | 0 |
E/K | rs548275593 | -0.524 | 0.999 | N | 0.591 | 0.402 | 0.352693368174 | gnomAD-4.0.0 | 3.72259E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.48808E-04 | 1.60333E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1809 | likely_benign | 0.221 | benign | -0.724 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.47836658 | None | None | I |
E/C | 0.7842 | likely_pathogenic | 0.8516 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
E/D | 0.2528 | likely_benign | 0.3248 | benign | -1.13 | Destabilizing | 0.999 | D | 0.471 | neutral | N | 0.511967271 | None | None | I |
E/F | 0.8246 | likely_pathogenic | 0.8811 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
E/G | 0.2553 | likely_benign | 0.3212 | benign | -1.136 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.500807618 | None | None | I |
E/H | 0.4515 | ambiguous | 0.5926 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/I | 0.5344 | ambiguous | 0.6119 | pathogenic | 0.417 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
E/K | 0.2467 | likely_benign | 0.3469 | ambiguous | -0.722 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.482459585 | None | None | I |
E/L | 0.5943 | likely_pathogenic | 0.7062 | pathogenic | 0.417 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
E/M | 0.5572 | ambiguous | 0.6449 | pathogenic | 0.818 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/N | 0.3445 | ambiguous | 0.4435 | ambiguous | -1.283 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
E/P | 0.9506 | likely_pathogenic | 0.9716 | pathogenic | 0.059 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
E/Q | 0.1306 | likely_benign | 0.1803 | benign | -1.079 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.480503793 | None | None | I |
E/R | 0.3271 | likely_benign | 0.4394 | ambiguous | -0.35 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
E/S | 0.1898 | likely_benign | 0.2364 | benign | -1.635 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
E/T | 0.2207 | likely_benign | 0.2782 | benign | -1.286 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
E/V | 0.3053 | likely_benign | 0.3635 | ambiguous | 0.059 | Stabilizing | 1.0 | D | 0.789 | deleterious | N | 0.501612672 | None | None | I |
E/W | 0.9307 | likely_pathogenic | 0.9598 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
E/Y | 0.6956 | likely_pathogenic | 0.782 | pathogenic | 0.372 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.