Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16117 | 48574;48575;48576 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
N2AB | 14476 | 43651;43652;43653 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
N2A | 13549 | 40870;40871;40872 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
N2B | 7052 | 21379;21380;21381 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
Novex-1 | 7177 | 21754;21755;21756 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
Novex-2 | 7244 | 21955;21956;21957 | chr2:178615752;178615751;178615750 | chr2:179480479;179480478;179480477 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.002 | N | 0.189 | 0.118 | 0.146414634003 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
P/L | None | None | 0.379 | N | 0.495 | 0.258 | 0.52586976336 | gnomAD-4.0.0 | 1.59514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4346E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0873 | likely_benign | 0.1023 | benign | -1.054 | Destabilizing | 0.002 | N | 0.189 | neutral | N | 0.467776596 | None | None | N |
P/C | 0.4169 | ambiguous | 0.5056 | ambiguous | -0.928 | Destabilizing | 0.977 | D | 0.555 | neutral | None | None | None | None | N |
P/D | 0.4007 | ambiguous | 0.4407 | ambiguous | -0.634 | Destabilizing | 0.617 | D | 0.429 | neutral | None | None | None | None | N |
P/E | 0.266 | likely_benign | 0.2852 | benign | -0.663 | Destabilizing | 0.617 | D | 0.441 | neutral | None | None | None | None | N |
P/F | 0.4991 | ambiguous | 0.5676 | pathogenic | -0.857 | Destabilizing | 0.92 | D | 0.569 | neutral | None | None | None | None | N |
P/G | 0.2222 | likely_benign | 0.2469 | benign | -1.316 | Destabilizing | 0.25 | N | 0.447 | neutral | None | None | None | None | N |
P/H | 0.1802 | likely_benign | 0.2095 | benign | -0.709 | Destabilizing | 0.99 | D | 0.535 | neutral | N | 0.474290641 | None | None | N |
P/I | 0.3471 | ambiguous | 0.4076 | ambiguous | -0.464 | Destabilizing | 0.85 | D | 0.555 | neutral | None | None | None | None | N |
P/K | 0.236 | likely_benign | 0.2662 | benign | -0.908 | Destabilizing | 0.617 | D | 0.429 | neutral | None | None | None | None | N |
P/L | 0.1269 | likely_benign | 0.1522 | benign | -0.464 | Destabilizing | 0.379 | N | 0.495 | neutral | N | 0.463903402 | None | None | N |
P/M | 0.2762 | likely_benign | 0.342 | ambiguous | -0.514 | Destabilizing | 0.972 | D | 0.539 | neutral | None | None | None | None | N |
P/N | 0.2623 | likely_benign | 0.304 | benign | -0.749 | Destabilizing | 0.617 | D | 0.522 | neutral | None | None | None | None | N |
P/Q | 0.152 | likely_benign | 0.1719 | benign | -0.9 | Destabilizing | 0.92 | D | 0.534 | neutral | None | None | None | None | N |
P/R | 0.1675 | likely_benign | 0.1846 | benign | -0.388 | Destabilizing | 0.81 | D | 0.553 | neutral | N | 0.446093752 | None | None | N |
P/S | 0.112 | likely_benign | 0.1263 | benign | -1.248 | Destabilizing | 0.007 | N | 0.185 | neutral | N | 0.386471922 | None | None | N |
P/T | 0.0926 | likely_benign | 0.1046 | benign | -1.154 | Destabilizing | 0.007 | N | 0.186 | neutral | N | 0.338847992 | None | None | N |
P/V | 0.2251 | likely_benign | 0.2674 | benign | -0.624 | Destabilizing | 0.447 | N | 0.485 | neutral | None | None | None | None | N |
P/W | 0.6012 | likely_pathogenic | 0.6673 | pathogenic | -0.975 | Destabilizing | 0.992 | D | 0.617 | neutral | None | None | None | None | N |
P/Y | 0.4272 | ambiguous | 0.4927 | ambiguous | -0.687 | Destabilizing | 0.972 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.