Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1612 | 5059;5060;5061 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
N2AB | 1612 | 5059;5060;5061 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
N2A | 1612 | 5059;5060;5061 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
N2B | 1566 | 4921;4922;4923 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
Novex-1 | 1566 | 4921;4922;4923 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
Novex-2 | 1566 | 4921;4922;4923 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
Novex-3 | 1612 | 5059;5060;5061 | chr2:178777030;178777029;178777028 | chr2:179641757;179641756;179641755 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1445985420 | 0.259 | 0.062 | N | 0.448 | 0.339 | 0.226586394389 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 8.68E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1445985420 | 0.259 | 0.062 | N | 0.448 | 0.339 | 0.226586394389 | gnomAD-3.1.2 | 7.88E-05 | None | None | None | None | N | None | 0 | 7.85443E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1445985420 | 0.259 | 0.062 | N | 0.448 | 0.339 | 0.226586394389 | gnomAD-4.0.0 | 2.17728E-05 | None | None | None | None | N | None | 0 | 2.88116E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2189 | likely_benign | 0.163 | benign | -0.583 | Destabilizing | None | N | 0.327 | neutral | N | 0.475255255 | None | None | N |
E/C | 0.9179 | likely_pathogenic | 0.8554 | pathogenic | 0.041 | Stabilizing | 0.935 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/D | 0.2359 | likely_benign | 0.2061 | benign | -0.66 | Destabilizing | 0.117 | N | 0.423 | neutral | N | 0.50268043 | None | None | N |
E/F | 0.7328 | likely_pathogenic | 0.6398 | pathogenic | -0.61 | Destabilizing | 0.235 | N | 0.735 | prob.delet. | None | None | None | None | N |
E/G | 0.378 | ambiguous | 0.2899 | benign | -0.818 | Destabilizing | 0.062 | N | 0.631 | neutral | N | 0.465616644 | None | None | N |
E/H | 0.6042 | likely_pathogenic | 0.4938 | ambiguous | -0.748 | Destabilizing | 0.555 | D | 0.503 | neutral | None | None | None | None | N |
E/I | 0.3276 | likely_benign | 0.2483 | benign | 0.016 | Stabilizing | 0.235 | N | 0.677 | prob.neutral | None | None | None | None | N |
E/K | 0.26 | likely_benign | 0.1875 | benign | 0.174 | Stabilizing | 0.062 | N | 0.448 | neutral | N | 0.485155052 | None | None | N |
E/L | 0.4637 | ambiguous | 0.3616 | ambiguous | 0.016 | Stabilizing | 0.001 | N | 0.485 | neutral | None | None | None | None | N |
E/M | 0.4385 | ambiguous | 0.347 | ambiguous | 0.389 | Stabilizing | 0.235 | N | 0.693 | prob.neutral | None | None | None | None | N |
E/N | 0.3798 | ambiguous | 0.3044 | benign | -0.115 | Destabilizing | 0.38 | N | 0.481 | neutral | None | None | None | None | N |
E/P | 0.9841 | likely_pathogenic | 0.9749 | pathogenic | -0.163 | Destabilizing | 0.555 | D | 0.622 | neutral | None | None | None | None | N |
E/Q | 0.1903 | likely_benign | 0.1508 | benign | -0.1 | Destabilizing | 0.002 | N | 0.179 | neutral | N | 0.462288111 | None | None | N |
E/R | 0.465 | ambiguous | 0.349 | ambiguous | 0.214 | Stabilizing | 0.235 | N | 0.48 | neutral | None | None | None | None | N |
E/S | 0.2931 | likely_benign | 0.2284 | benign | -0.306 | Destabilizing | 0.081 | N | 0.435 | neutral | None | None | None | None | N |
E/T | 0.2843 | likely_benign | 0.2177 | benign | -0.115 | Destabilizing | 0.149 | N | 0.538 | neutral | None | None | None | None | N |
E/V | 0.2008 | likely_benign | 0.1544 | benign | -0.163 | Destabilizing | 0.062 | N | 0.619 | neutral | N | 0.463774308 | None | None | N |
E/W | 0.9388 | likely_pathogenic | 0.8933 | pathogenic | -0.481 | Destabilizing | 0.935 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Y | 0.6947 | likely_pathogenic | 0.5921 | pathogenic | -0.36 | Destabilizing | 0.555 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.