Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1620 | 5083;5084;5085 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
N2AB | 1620 | 5083;5084;5085 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
N2A | 1620 | 5083;5084;5085 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
N2B | 1574 | 4945;4946;4947 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
Novex-1 | 1574 | 4945;4946;4947 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
Novex-2 | 1574 | 4945;4946;4947 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
Novex-3 | 1620 | 5083;5084;5085 | chr2:178777006;178777005;178777004 | chr2:179641733;179641732;179641731 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.001 | N | 0.222 | 0.104 | 0.159798565429 | gnomAD-4.0.0 | 1.59077E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0837 | likely_benign | 0.0786 | benign | -1.076 | Destabilizing | 0.001 | N | 0.222 | neutral | N | 0.44698644 | None | None | N |
T/C | 0.4904 | ambiguous | 0.4576 | ambiguous | -1.394 | Destabilizing | 0.935 | D | 0.605 | neutral | None | None | None | None | N |
T/D | 0.9017 | likely_pathogenic | 0.8992 | pathogenic | -1.858 | Destabilizing | 0.38 | N | 0.626 | neutral | None | None | None | None | N |
T/E | 0.8529 | likely_pathogenic | 0.8481 | pathogenic | -1.771 | Destabilizing | 0.149 | N | 0.611 | neutral | None | None | None | None | N |
T/F | 0.6587 | likely_pathogenic | 0.6451 | pathogenic | -1.332 | Destabilizing | 0.38 | N | 0.621 | neutral | None | None | None | None | N |
T/G | 0.497 | ambiguous | 0.4874 | ambiguous | -1.325 | Destabilizing | 0.149 | N | 0.552 | neutral | None | None | None | None | N |
T/H | 0.8237 | likely_pathogenic | 0.8225 | pathogenic | -1.537 | Destabilizing | 0.935 | D | 0.601 | neutral | None | None | None | None | N |
T/I | 0.1108 | likely_benign | 0.1115 | benign | -0.477 | Destabilizing | 0.001 | N | 0.416 | neutral | N | 0.496907105 | None | None | N |
T/K | 0.8298 | likely_pathogenic | 0.8214 | pathogenic | -0.758 | Destabilizing | 0.149 | N | 0.609 | neutral | None | None | None | None | N |
T/L | 0.1269 | likely_benign | 0.1164 | benign | -0.477 | Destabilizing | 0.012 | N | 0.521 | neutral | None | None | None | None | N |
T/M | 0.1298 | likely_benign | 0.129 | benign | -0.389 | Destabilizing | 0.38 | N | 0.618 | neutral | None | None | None | None | N |
T/N | 0.4878 | ambiguous | 0.4729 | ambiguous | -1.237 | Destabilizing | 0.317 | N | 0.601 | neutral | D | 0.589367013 | None | None | N |
T/P | 0.253 | likely_benign | 0.2557 | benign | -0.649 | Destabilizing | 0.484 | N | 0.631 | neutral | N | 0.511580302 | None | None | N |
T/Q | 0.786 | likely_pathogenic | 0.7861 | pathogenic | -1.413 | Destabilizing | 0.555 | D | 0.651 | neutral | None | None | None | None | N |
T/R | 0.7508 | likely_pathogenic | 0.7438 | pathogenic | -0.558 | Destabilizing | 0.555 | D | 0.627 | neutral | None | None | None | None | N |
T/S | 0.2274 | likely_benign | 0.218 | benign | -1.366 | Destabilizing | 0.005 | N | 0.351 | neutral | N | 0.509838353 | None | None | N |
T/V | 0.0974 | likely_benign | 0.0925 | benign | -0.649 | Destabilizing | 0.012 | N | 0.509 | neutral | None | None | None | None | N |
T/W | 0.9575 | likely_pathogenic | 0.9549 | pathogenic | -1.368 | Destabilizing | 0.935 | D | 0.612 | neutral | None | None | None | None | N |
T/Y | 0.8582 | likely_pathogenic | 0.8541 | pathogenic | -0.983 | Destabilizing | 0.555 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.