Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16215 | 48868;48869;48870 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
N2AB | 14574 | 43945;43946;43947 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
N2A | 13647 | 41164;41165;41166 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
N2B | 7150 | 21673;21674;21675 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
Novex-1 | 7275 | 22048;22049;22050 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
Novex-2 | 7342 | 22249;22250;22251 | chr2:178614964;178614963;178614962 | chr2:179479691;179479690;179479689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.103 | N | 0.261 | 0.222 | 0.156986980423 | gnomAD-4.0.0 | 6.91755E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06434E-07 | 0 | 0 |
E/Q | rs1193666714 | None | 0.103 | N | 0.389 | 0.115 | 0.117506650769 | gnomAD-4.0.0 | 6.91755E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06434E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.146 | likely_benign | 0.1797 | benign | -0.845 | Destabilizing | 0.896 | D | 0.637 | neutral | N | 0.476966955 | None | None | N |
E/C | 0.8099 | likely_pathogenic | 0.8709 | pathogenic | -0.326 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.3823 | ambiguous | 0.4464 | ambiguous | -0.708 | Destabilizing | 0.896 | D | 0.525 | neutral | N | 0.478471322 | None | None | N |
E/F | 0.8259 | likely_pathogenic | 0.8759 | pathogenic | -0.29 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
E/G | 0.3877 | ambiguous | 0.4593 | ambiguous | -1.161 | Destabilizing | 0.896 | D | 0.671 | neutral | N | 0.475053061 | None | None | N |
E/H | 0.5571 | ambiguous | 0.653 | pathogenic | -0.338 | Destabilizing | 0.988 | D | 0.592 | neutral | None | None | None | None | N |
E/I | 0.2899 | likely_benign | 0.3707 | ambiguous | 0.004 | Stabilizing | 0.988 | D | 0.771 | deleterious | None | None | None | None | N |
E/K | 0.1821 | likely_benign | 0.2415 | benign | -0.134 | Destabilizing | 0.103 | N | 0.261 | neutral | N | 0.407050758 | None | None | N |
E/L | 0.3354 | likely_benign | 0.4291 | ambiguous | 0.004 | Stabilizing | 0.919 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.3568 | ambiguous | 0.4416 | ambiguous | 0.348 | Stabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
E/N | 0.3991 | ambiguous | 0.5017 | ambiguous | -0.705 | Destabilizing | 0.919 | D | 0.537 | neutral | None | None | None | None | N |
E/P | 0.5307 | ambiguous | 0.5874 | pathogenic | -0.258 | Destabilizing | 0.988 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/Q | 0.1345 | likely_benign | 0.173 | benign | -0.595 | Destabilizing | 0.103 | N | 0.389 | neutral | N | 0.452642185 | None | None | N |
E/R | 0.295 | likely_benign | 0.3741 | ambiguous | 0.152 | Stabilizing | 0.851 | D | 0.517 | neutral | None | None | None | None | N |
E/S | 0.3119 | likely_benign | 0.3982 | ambiguous | -0.942 | Destabilizing | 0.919 | D | 0.53 | neutral | None | None | None | None | N |
E/T | 0.2011 | likely_benign | 0.2489 | benign | -0.669 | Destabilizing | 0.919 | D | 0.645 | neutral | None | None | None | None | N |
E/V | 0.1508 | likely_benign | 0.19 | benign | -0.258 | Destabilizing | 0.968 | D | 0.691 | prob.neutral | N | 0.427564643 | None | None | N |
E/W | 0.9443 | likely_pathogenic | 0.9619 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/Y | 0.7541 | likely_pathogenic | 0.8181 | pathogenic | -0.008 | Destabilizing | 0.996 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.