Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16225 | 48898;48899;48900 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
N2AB | 14584 | 43975;43976;43977 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
N2A | 13657 | 41194;41195;41196 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
N2B | 7160 | 21703;21704;21705 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
Novex-1 | 7285 | 22078;22079;22080 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
Novex-2 | 7352 | 22279;22280;22281 | chr2:178614934;178614933;178614932 | chr2:179479661;179479660;179479659 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs781080078 | -2.483 | 1.0 | D | 0.851 | 0.858 | 0.804125093776 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.03E-05 | 0 |
Y/H | rs781080078 | -2.483 | 1.0 | D | 0.851 | 0.858 | 0.804125093776 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs781080078 | -2.483 | 1.0 | D | 0.851 | 0.858 | 0.804125093776 | gnomAD-4.0.0 | 3.93481E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.34804E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9853 | likely_pathogenic | 0.9863 | pathogenic | -3.305 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Y/C | 0.8465 | likely_pathogenic | 0.8742 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.791806324 | None | None | N |
Y/D | 0.9715 | likely_pathogenic | 0.9724 | pathogenic | -3.874 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.821204068 | None | None | N |
Y/E | 0.9914 | likely_pathogenic | 0.9913 | pathogenic | -3.661 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/F | 0.1463 | likely_benign | 0.1592 | benign | -1.423 | Destabilizing | 0.999 | D | 0.746 | deleterious | D | 0.697952648 | None | None | N |
Y/G | 0.9691 | likely_pathogenic | 0.9673 | pathogenic | -3.701 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
Y/H | 0.8077 | likely_pathogenic | 0.8231 | pathogenic | -2.474 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | D | 0.749644681 | None | None | N |
Y/I | 0.9407 | likely_pathogenic | 0.9486 | pathogenic | -1.961 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/K | 0.9954 | likely_pathogenic | 0.9951 | pathogenic | -2.569 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/L | 0.8853 | likely_pathogenic | 0.8899 | pathogenic | -1.961 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
Y/M | 0.9507 | likely_pathogenic | 0.9545 | pathogenic | -1.59 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Y/N | 0.865 | likely_pathogenic | 0.8667 | pathogenic | -3.428 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.821532956 | None | None | N |
Y/P | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Y/Q | 0.988 | likely_pathogenic | 0.9882 | pathogenic | -3.148 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/R | 0.9877 | likely_pathogenic | 0.9874 | pathogenic | -2.379 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
Y/S | 0.9503 | likely_pathogenic | 0.9547 | pathogenic | -3.666 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.821204068 | None | None | N |
Y/T | 0.9832 | likely_pathogenic | 0.9847 | pathogenic | -3.337 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Y/V | 0.9039 | likely_pathogenic | 0.9165 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Y/W | 0.6347 | likely_pathogenic | 0.6497 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.