Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16226 | 48901;48902;48903 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
N2AB | 14585 | 43978;43979;43980 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
N2A | 13658 | 41197;41198;41199 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
N2B | 7161 | 21706;21707;21708 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
Novex-1 | 7286 | 22081;22082;22083 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
Novex-2 | 7353 | 22282;22283;22284 | chr2:178614931;178614930;178614929 | chr2:179479658;179479657;179479656 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.41 | N | 0.623 | 0.219 | 0.489658423131 | gnomAD-4.0.0 | 6.93103E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07647E-07 | 0 | 0 |
A/T | None | None | 0.41 | N | 0.646 | 0.107 | 0.350088858571 | gnomAD-4.0.0 | 1.38581E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81494E-06 | 0 | 0 |
A/V | None | None | 0.581 | N | 0.68 | 0.174 | 0.499858025796 | gnomAD-4.0.0 | 6.93103E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.57268E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3187 | likely_benign | 0.3221 | benign | -0.643 | Destabilizing | 0.98 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/D | 0.7023 | likely_pathogenic | 0.6798 | pathogenic | -2.262 | Highly Destabilizing | 0.709 | D | 0.784 | deleterious | N | 0.4818366 | None | None | N |
A/E | 0.5434 | ambiguous | 0.515 | ambiguous | -2.025 | Highly Destabilizing | 0.764 | D | 0.758 | deleterious | None | None | None | None | N |
A/F | 0.4295 | ambiguous | 0.4119 | ambiguous | -0.486 | Destabilizing | 0.929 | D | 0.833 | deleterious | None | None | None | None | N |
A/G | 0.1655 | likely_benign | 0.1664 | benign | -1.391 | Destabilizing | 0.41 | N | 0.623 | neutral | N | 0.465825545 | None | None | N |
A/H | 0.6136 | likely_pathogenic | 0.5841 | pathogenic | -2.027 | Highly Destabilizing | 0.98 | D | 0.824 | deleterious | None | None | None | None | N |
A/I | 0.3552 | ambiguous | 0.3784 | ambiguous | 0.456 | Stabilizing | 0.866 | D | 0.777 | deleterious | None | None | None | None | N |
A/K | 0.7708 | likely_pathogenic | 0.7425 | pathogenic | -0.864 | Destabilizing | 0.764 | D | 0.759 | deleterious | None | None | None | None | N |
A/L | 0.2449 | likely_benign | 0.2453 | benign | 0.456 | Stabilizing | 0.648 | D | 0.749 | deleterious | None | None | None | None | N |
A/M | 0.2734 | likely_benign | 0.288 | benign | 0.213 | Stabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | N |
A/N | 0.3853 | ambiguous | 0.3962 | ambiguous | -1.254 | Destabilizing | 0.764 | D | 0.794 | deleterious | None | None | None | None | N |
A/P | 0.9589 | likely_pathogenic | 0.9597 | pathogenic | 0.046 | Stabilizing | 0.83 | D | 0.781 | deleterious | N | 0.466256289 | None | None | N |
A/Q | 0.436 | ambiguous | 0.4179 | ambiguous | -0.967 | Destabilizing | 0.866 | D | 0.792 | deleterious | None | None | None | None | N |
A/R | 0.6794 | likely_pathogenic | 0.6204 | pathogenic | -1.142 | Destabilizing | 0.866 | D | 0.787 | deleterious | None | None | None | None | N |
A/S | 0.0848 | likely_benign | 0.0909 | benign | -1.6 | Destabilizing | 0.01 | N | 0.371 | neutral | N | 0.434298719 | None | None | N |
A/T | 0.1113 | likely_benign | 0.1152 | benign | -1.242 | Destabilizing | 0.41 | N | 0.646 | neutral | N | 0.455855891 | None | None | N |
A/V | 0.2021 | likely_benign | 0.2055 | benign | 0.046 | Stabilizing | 0.581 | D | 0.68 | prob.neutral | N | 0.453011049 | None | None | N |
A/W | 0.8363 | likely_pathogenic | 0.8222 | pathogenic | -1.406 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
A/Y | 0.5585 | ambiguous | 0.5497 | ambiguous | -0.788 | Destabilizing | 0.98 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.