Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16230 | 48913;48914;48915 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
N2AB | 14589 | 43990;43991;43992 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
N2A | 13662 | 41209;41210;41211 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
N2B | 7165 | 21718;21719;21720 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
Novex-1 | 7290 | 22093;22094;22095 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
Novex-2 | 7357 | 22294;22295;22296 | chr2:178614919;178614918;178614917 | chr2:179479646;179479645;179479644 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | None | None | 1.0 | N | 0.688 | 0.424 | 0.356281029322 | gnomAD-4.0.0 | 1.64772E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9569E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8463 | likely_pathogenic | 0.7706 | pathogenic | -1.009 | Destabilizing | 0.97 | D | 0.651 | neutral | None | None | None | None | N |
K/C | 0.7855 | likely_pathogenic | 0.7441 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
K/D | 0.9897 | likely_pathogenic | 0.9836 | pathogenic | -1.917 | Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | N |
K/E | 0.8093 | likely_pathogenic | 0.7286 | pathogenic | -1.715 | Destabilizing | 0.961 | D | 0.689 | prob.neutral | N | 0.507635013 | None | None | N |
K/F | 0.9514 | likely_pathogenic | 0.9343 | pathogenic | -0.46 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
K/G | 0.9586 | likely_pathogenic | 0.93 | pathogenic | -1.411 | Destabilizing | 0.985 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/H | 0.7081 | likely_pathogenic | 0.6797 | pathogenic | -1.777 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/I | 0.6695 | likely_pathogenic | 0.595 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
K/L | 0.6788 | likely_pathogenic | 0.6114 | pathogenic | 0.082 | Stabilizing | 0.97 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/M | 0.4481 | ambiguous | 0.3644 | ambiguous | -0.281 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.482814334 | None | None | N |
K/N | 0.952 | likely_pathogenic | 0.9344 | pathogenic | -1.755 | Destabilizing | 0.994 | D | 0.622 | neutral | N | 0.518941591 | None | None | N |
K/P | 0.9988 | likely_pathogenic | 0.9977 | pathogenic | -0.257 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Q | 0.4078 | ambiguous | 0.3508 | ambiguous | -1.577 | Destabilizing | 0.989 | D | 0.641 | neutral | N | 0.464486478 | None | None | N |
K/R | 0.1112 | likely_benign | 0.1044 | benign | -1.412 | Destabilizing | 0.031 | N | 0.326 | neutral | N | 0.400127592 | None | None | N |
K/S | 0.8917 | likely_pathogenic | 0.8361 | pathogenic | -2.131 | Highly Destabilizing | 0.985 | D | 0.647 | neutral | None | None | None | None | N |
K/T | 0.5858 | likely_pathogenic | 0.4609 | ambiguous | -1.722 | Destabilizing | 0.98 | D | 0.639 | neutral | N | 0.467024883 | None | None | N |
K/V | 0.6077 | likely_pathogenic | 0.5262 | ambiguous | -0.257 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/W | 0.9483 | likely_pathogenic | 0.9288 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
K/Y | 0.8925 | likely_pathogenic | 0.875 | pathogenic | -0.222 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.