Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16289 | 49090;49091;49092 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
N2AB | 14648 | 44167;44168;44169 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
N2A | 13721 | 41386;41387;41388 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
N2B | 7224 | 21895;21896;21897 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
Novex-1 | 7349 | 22270;22271;22272 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
Novex-2 | 7416 | 22471;22472;22473 | chr2:178614649;178614648;178614647 | chr2:179479376;179479375;179479374 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | None | N | 0.263 | 0.087 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3218 | likely_benign | 0.2602 | benign | -0.006 | Destabilizing | 0.035 | N | 0.351 | neutral | None | None | None | None | I |
K/C | 0.6821 | likely_pathogenic | 0.5931 | pathogenic | -0.334 | Destabilizing | 0.824 | D | 0.39 | neutral | None | None | None | None | I |
K/D | 0.6234 | likely_pathogenic | 0.5467 | ambiguous | 0.005 | Stabilizing | 0.149 | N | 0.407 | neutral | None | None | None | None | I |
K/E | 0.198 | likely_benign | 0.1637 | benign | 0.041 | Stabilizing | 0.027 | N | 0.381 | neutral | N | 0.443515681 | None | None | I |
K/F | 0.8358 | likely_pathogenic | 0.7684 | pathogenic | -0.053 | Destabilizing | 0.555 | D | 0.401 | neutral | None | None | None | None | I |
K/G | 0.5313 | ambiguous | 0.437 | ambiguous | -0.247 | Destabilizing | 0.149 | N | 0.395 | neutral | None | None | None | None | I |
K/H | 0.2996 | likely_benign | 0.2595 | benign | -0.457 | Destabilizing | 0.38 | N | 0.38 | neutral | None | None | None | None | I |
K/I | 0.3586 | ambiguous | 0.3109 | benign | 0.559 | Stabilizing | 0.188 | N | 0.424 | neutral | N | 0.510782303 | None | None | I |
K/L | 0.4009 | ambiguous | 0.3205 | benign | 0.559 | Stabilizing | 0.081 | N | 0.395 | neutral | None | None | None | None | I |
K/M | 0.2881 | likely_benign | 0.2338 | benign | 0.169 | Stabilizing | 0.555 | D | 0.378 | neutral | None | None | None | None | I |
K/N | 0.4242 | ambiguous | 0.3513 | ambiguous | -0.006 | Destabilizing | 0.117 | N | 0.333 | neutral | N | 0.499121879 | None | None | I |
K/P | 0.9365 | likely_pathogenic | 0.8651 | pathogenic | 0.4 | Stabilizing | 0.555 | D | 0.408 | neutral | None | None | None | None | I |
K/Q | 0.1271 | likely_benign | 0.1095 | benign | -0.11 | Destabilizing | None | N | 0.147 | neutral | N | 0.482615575 | None | None | I |
K/R | 0.0838 | likely_benign | 0.0794 | benign | -0.182 | Destabilizing | None | N | 0.137 | neutral | N | 0.455118483 | None | None | I |
K/S | 0.3881 | ambiguous | 0.3096 | benign | -0.468 | Destabilizing | 0.035 | N | 0.326 | neutral | None | None | None | None | I |
K/T | 0.1433 | likely_benign | 0.121 | benign | -0.271 | Destabilizing | None | N | 0.263 | neutral | N | 0.443170484 | None | None | I |
K/V | 0.2687 | likely_benign | 0.2299 | benign | 0.4 | Stabilizing | 0.081 | N | 0.421 | neutral | None | None | None | None | I |
K/W | 0.8472 | likely_pathogenic | 0.7705 | pathogenic | -0.076 | Destabilizing | 0.935 | D | 0.431 | neutral | None | None | None | None | I |
K/Y | 0.7236 | likely_pathogenic | 0.646 | pathogenic | 0.259 | Stabilizing | 0.555 | D | 0.399 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.