Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16302 | 49129;49130;49131 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
N2AB | 14661 | 44206;44207;44208 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
N2A | 13734 | 41425;41426;41427 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
N2B | 7237 | 21934;21935;21936 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
Novex-1 | 7362 | 22309;22310;22311 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
Novex-2 | 7429 | 22510;22511;22512 | chr2:178614610;178614609;178614608 | chr2:179479337;179479336;179479335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2056963801 | None | 1.0 | N | 0.456 | 0.202 | 0.245101548738 | gnomAD-4.0.0 | 6.84735E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53254E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5947 | likely_pathogenic | 0.6625 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.537666958 | None | None | N |
D/C | 0.8641 | likely_pathogenic | 0.8778 | pathogenic | -0.038 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
D/E | 0.4017 | ambiguous | 0.4608 | ambiguous | -0.274 | Destabilizing | 1.0 | D | 0.456 | neutral | N | 0.452754387 | None | None | N |
D/F | 0.9554 | likely_pathogenic | 0.968 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
D/G | 0.335 | likely_benign | 0.363 | ambiguous | -0.434 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.442977029 | None | None | N |
D/H | 0.7547 | likely_pathogenic | 0.7846 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.749 | deleterious | D | 0.540211183 | None | None | N |
D/I | 0.9133 | likely_pathogenic | 0.9352 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
D/K | 0.8772 | likely_pathogenic | 0.9075 | pathogenic | 0.254 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
D/L | 0.8714 | likely_pathogenic | 0.8941 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/M | 0.936 | likely_pathogenic | 0.9488 | pathogenic | 0.261 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
D/N | 0.1955 | likely_benign | 0.2134 | benign | -0.015 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.44535671 | None | None | N |
D/P | 0.9544 | likely_pathogenic | 0.9667 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
D/Q | 0.7885 | likely_pathogenic | 0.8244 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
D/R | 0.9057 | likely_pathogenic | 0.9284 | pathogenic | 0.451 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
D/S | 0.3202 | likely_benign | 0.3563 | ambiguous | -0.131 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
D/T | 0.4846 | ambiguous | 0.5281 | ambiguous | 0.016 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
D/V | 0.753 | likely_pathogenic | 0.7996 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.832 | deleterious | D | 0.572380626 | None | None | N |
D/W | 0.9869 | likely_pathogenic | 0.9909 | pathogenic | -0.071 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
D/Y | 0.7623 | likely_pathogenic | 0.823 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.817 | deleterious | D | 0.63411527 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.