Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1631 | 5116;5117;5118 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
N2AB | 1631 | 5116;5117;5118 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
N2A | 1631 | 5116;5117;5118 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
N2B | 1585 | 4978;4979;4980 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
Novex-1 | 1585 | 4978;4979;4980 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
Novex-2 | 1585 | 4978;4979;4980 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
Novex-3 | 1631 | 5116;5117;5118 | chr2:178776973;178776972;178776971 | chr2:179641700;179641699;179641698 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1270981853 | -1.404 | 0.999 | D | 0.585 | 0.484 | 0.40218521252 | gnomAD-2.1.1 | 4E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1270981853 | -1.404 | 0.999 | D | 0.585 | 0.484 | 0.40218521252 | gnomAD-4.0.0 | 1.59088E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6329 | likely_pathogenic | 0.52 | ambiguous | -1.068 | Destabilizing | 0.999 | D | 0.585 | neutral | D | 0.556596464 | None | None | N |
T/C | 0.9613 | likely_pathogenic | 0.9349 | pathogenic | -0.71 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
T/D | 0.9969 | likely_pathogenic | 0.9943 | pathogenic | -1.007 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
T/E | 0.9889 | likely_pathogenic | 0.983 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
T/F | 0.9601 | likely_pathogenic | 0.9433 | pathogenic | -0.702 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
T/G | 0.9613 | likely_pathogenic | 0.9358 | pathogenic | -1.475 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
T/H | 0.9774 | likely_pathogenic | 0.9634 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
T/I | 0.7992 | likely_pathogenic | 0.7343 | pathogenic | -0.014 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.497234809 | None | None | N |
T/K | 0.981 | likely_pathogenic | 0.9687 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
T/L | 0.6948 | likely_pathogenic | 0.6211 | pathogenic | -0.014 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
T/M | 0.4885 | ambiguous | 0.4041 | ambiguous | -0.021 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
T/N | 0.944 | likely_pathogenic | 0.9067 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | N | 0.513059186 | None | None | N |
T/P | 0.978 | likely_pathogenic | 0.9637 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.680099881 | None | None | N |
T/Q | 0.9666 | likely_pathogenic | 0.9455 | pathogenic | -0.924 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
T/R | 0.9757 | likely_pathogenic | 0.9616 | pathogenic | -0.717 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
T/S | 0.8145 | likely_pathogenic | 0.7258 | pathogenic | -1.367 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.50767699 | None | None | N |
T/V | 0.5567 | ambiguous | 0.4979 | ambiguous | -0.333 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
T/W | 0.9918 | likely_pathogenic | 0.9876 | pathogenic | -0.793 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
T/Y | 0.9778 | likely_pathogenic | 0.966 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.