Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16313 | 49162;49163;49164 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
N2AB | 14672 | 44239;44240;44241 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
N2A | 13745 | 41458;41459;41460 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
N2B | 7248 | 21967;21968;21969 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
Novex-1 | 7373 | 22342;22343;22344 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
Novex-2 | 7440 | 22543;22544;22545 | chr2:178614577;178614576;178614575 | chr2:179479304;179479303;179479302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.927 | N | 0.481 | 0.313 | 0.493964856914 | gnomAD-4.0.0 | 1.59406E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5113 | ambiguous | 0.4147 | ambiguous | -0.312 | Destabilizing | 0.329 | N | 0.362 | neutral | None | None | None | None | N |
K/C | 0.6227 | likely_pathogenic | 0.5478 | ambiguous | -0.318 | Destabilizing | 0.995 | D | 0.447 | neutral | None | None | None | None | N |
K/D | 0.7923 | likely_pathogenic | 0.7143 | pathogenic | 0.043 | Stabilizing | 0.495 | N | 0.405 | neutral | None | None | None | None | N |
K/E | 0.3652 | ambiguous | 0.2756 | benign | 0.083 | Stabilizing | 0.27 | N | 0.265 | neutral | N | 0.469864189 | None | None | N |
K/F | 0.7773 | likely_pathogenic | 0.7227 | pathogenic | -0.368 | Destabilizing | 0.944 | D | 0.465 | neutral | None | None | None | None | N |
K/G | 0.6739 | likely_pathogenic | 0.5871 | pathogenic | -0.593 | Destabilizing | 0.495 | N | 0.472 | neutral | None | None | None | None | N |
K/H | 0.2426 | likely_benign | 0.1979 | benign | -1.066 | Destabilizing | 0.001 | N | 0.189 | neutral | None | None | None | None | N |
K/I | 0.398 | ambiguous | 0.3279 | benign | 0.374 | Stabilizing | 0.927 | D | 0.481 | neutral | N | 0.465614651 | None | None | N |
K/L | 0.4596 | ambiguous | 0.3927 | ambiguous | 0.374 | Stabilizing | 0.704 | D | 0.476 | neutral | None | None | None | None | N |
K/M | 0.2763 | likely_benign | 0.2152 | benign | 0.392 | Stabilizing | 0.944 | D | 0.449 | neutral | None | None | None | None | N |
K/N | 0.4785 | ambiguous | 0.4034 | ambiguous | -0.005 | Destabilizing | 0.425 | N | 0.288 | neutral | N | 0.374612772 | None | None | N |
K/P | 0.9786 | likely_pathogenic | 0.9734 | pathogenic | 0.175 | Stabilizing | 0.828 | D | 0.479 | neutral | None | None | None | None | N |
K/Q | 0.1485 | likely_benign | 0.1183 | benign | -0.225 | Destabilizing | 0.023 | N | 0.143 | neutral | N | 0.469389385 | None | None | N |
K/R | 0.0973 | likely_benign | 0.0849 | benign | -0.302 | Destabilizing | 0.27 | N | 0.305 | neutral | N | 0.452826008 | None | None | N |
K/S | 0.5008 | ambiguous | 0.415 | ambiguous | -0.629 | Destabilizing | 0.037 | N | 0.127 | neutral | None | None | None | None | N |
K/T | 0.2151 | likely_benign | 0.1592 | benign | -0.413 | Destabilizing | 0.27 | N | 0.401 | neutral | N | 0.429701722 | None | None | N |
K/V | 0.3839 | ambiguous | 0.3069 | benign | 0.175 | Stabilizing | 0.828 | D | 0.475 | neutral | None | None | None | None | N |
K/W | 0.8002 | likely_pathogenic | 0.7517 | pathogenic | -0.261 | Destabilizing | 0.995 | D | 0.459 | neutral | None | None | None | None | N |
K/Y | 0.5916 | likely_pathogenic | 0.5366 | ambiguous | 0.077 | Stabilizing | 0.704 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.