Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16315 | 49168;49169;49170 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
N2AB | 14674 | 44245;44246;44247 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
N2A | 13747 | 41464;41465;41466 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
N2B | 7250 | 21973;21974;21975 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
Novex-1 | 7375 | 22348;22349;22350 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
Novex-2 | 7442 | 22549;22550;22551 | chr2:178614571;178614570;178614569 | chr2:179479298;179479297;179479296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs760198616 | -0.532 | 0.997 | D | 0.621 | 0.698 | 0.513503867364 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
T/P | rs760198616 | -0.532 | 0.997 | D | 0.621 | 0.698 | 0.513503867364 | gnomAD-4.0.0 | 2.05414E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1087 | likely_benign | 0.1108 | benign | -0.917 | Destabilizing | 0.939 | D | 0.533 | neutral | D | 0.565945881 | None | None | N |
T/C | 0.3282 | likely_benign | 0.317 | benign | -0.872 | Destabilizing | 0.999 | D | 0.64 | neutral | None | None | None | None | N |
T/D | 0.6994 | likely_pathogenic | 0.7239 | pathogenic | -1.808 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | N |
T/E | 0.5022 | ambiguous | 0.5077 | ambiguous | -1.665 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
T/F | 0.2517 | likely_benign | 0.279 | benign | -0.713 | Destabilizing | 0.986 | D | 0.643 | neutral | None | None | None | None | N |
T/G | 0.4563 | ambiguous | 0.4328 | ambiguous | -1.293 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
T/H | 0.3 | likely_benign | 0.3165 | benign | -1.627 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
T/I | 0.1141 | likely_benign | 0.1172 | benign | 0.04 | Stabilizing | 0.046 | N | 0.389 | neutral | N | 0.513806502 | None | None | N |
T/K | 0.2326 | likely_benign | 0.2325 | benign | -0.827 | Destabilizing | 0.991 | D | 0.623 | neutral | N | 0.508132733 | None | None | N |
T/L | 0.0958 | likely_benign | 0.0935 | benign | 0.04 | Stabilizing | 0.807 | D | 0.547 | neutral | None | None | None | None | N |
T/M | 0.0782 | likely_benign | 0.0792 | benign | 0.17 | Stabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | N |
T/N | 0.2225 | likely_benign | 0.2278 | benign | -1.441 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
T/P | 0.883 | likely_pathogenic | 0.911 | pathogenic | -0.246 | Destabilizing | 0.997 | D | 0.621 | neutral | D | 0.673261331 | None | None | N |
T/Q | 0.3049 | likely_benign | 0.3031 | benign | -1.336 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
T/R | 0.2049 | likely_benign | 0.2099 | benign | -0.912 | Destabilizing | 0.997 | D | 0.622 | neutral | N | 0.510103165 | None | None | N |
T/S | 0.1683 | likely_benign | 0.1699 | benign | -1.516 | Destabilizing | 0.969 | D | 0.537 | neutral | N | 0.510764803 | None | None | N |
T/V | 0.0883 | likely_benign | 0.085 | benign | -0.246 | Destabilizing | 0.807 | D | 0.528 | neutral | None | None | None | None | N |
T/W | 0.6461 | likely_pathogenic | 0.6608 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
T/Y | 0.3334 | likely_benign | 0.3543 | ambiguous | -0.532 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.