Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16318 | 49177;49178;49179 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
N2AB | 14677 | 44254;44255;44256 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
N2A | 13750 | 41473;41474;41475 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
N2B | 7253 | 21982;21983;21984 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
Novex-1 | 7378 | 22357;22358;22359 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
Novex-2 | 7445 | 22558;22559;22560 | chr2:178614562;178614561;178614560 | chr2:179479289;179479288;179479287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs962564634 | None | 0.889 | D | 0.415 | 0.489 | 0.721054117171 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
I/L | rs962564634 | None | 0.889 | D | 0.415 | 0.489 | 0.721054117171 | gnomAD-4.0.0 | 1.31709E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94594E-05 | 0 | 0 |
I/T | rs72677243 | -2.811 | 0.989 | D | 0.753 | 0.748 | None | gnomAD-2.1.1 | 1.17164E-03 | None | None | None | None | N | None | 1.24131E-04 | 1.10726E-03 | None | 1.02693E-02 | 5.2E-05 | None | 4.25142E-04 | None | 8.01E-05 | 1.19961E-03 | 1.41084E-03 |
I/T | rs72677243 | -2.811 | 0.989 | D | 0.753 | 0.748 | None | gnomAD-3.1.2 | 9.55242E-04 | None | None | None | None | N | None | 2.41663E-04 | 7.8854E-04 | 0 | 1.09763E-02 | 0 | None | 0 | 9.49367E-03 | 1.10463E-03 | 4.16667E-04 | 2.39693E-03 |
I/T | rs72677243 | -2.811 | 0.989 | D | 0.753 | 0.748 | None | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 8E-04 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
I/T | rs72677243 | -2.811 | 0.989 | D | 0.753 | 0.748 | None | gnomAD-4.0.0 | 1.02707E-03 | None | None | None | None | N | None | 2.40327E-04 | 1.08579E-03 | None | 9.70907E-03 | 0 | None | 4.69087E-05 | 1.65344E-03 | 9.66821E-04 | 5.82341E-04 | 1.28201E-03 |
I/V | rs962564634 | -1.651 | 0.333 | D | 0.235 | 0.358 | 0.678242657409 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs962564634 | -1.651 | 0.333 | D | 0.235 | 0.358 | 0.678242657409 | gnomAD-4.0.0 | 3.42363E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79979E-06 | 3.47987E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9188 | likely_pathogenic | 0.9192 | pathogenic | -2.792 | Highly Destabilizing | 0.992 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/C | 0.9614 | likely_pathogenic | 0.9542 | pathogenic | -2.322 | Highly Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9985 | pathogenic | -3.021 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
I/E | 0.996 | likely_pathogenic | 0.9956 | pathogenic | -2.859 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/F | 0.6523 | likely_pathogenic | 0.5986 | pathogenic | -1.778 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | D | 0.650179428 | None | None | N |
I/G | 0.9949 | likely_pathogenic | 0.9944 | pathogenic | -3.278 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/H | 0.9916 | likely_pathogenic | 0.9908 | pathogenic | -2.49 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
I/K | 0.9886 | likely_pathogenic | 0.9888 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
I/L | 0.3612 | ambiguous | 0.3372 | benign | -1.41 | Destabilizing | 0.889 | D | 0.415 | neutral | D | 0.598196869 | None | None | N |
I/M | 0.3301 | likely_benign | 0.3102 | benign | -1.41 | Destabilizing | 0.998 | D | 0.684 | prob.neutral | D | 0.691398815 | None | None | N |
I/N | 0.9797 | likely_pathogenic | 0.9777 | pathogenic | -2.475 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.809461466 | None | None | N |
I/P | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -1.85 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/Q | 0.9904 | likely_pathogenic | 0.9899 | pathogenic | -2.468 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/R | 0.9818 | likely_pathogenic | 0.9818 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/S | 0.9666 | likely_pathogenic | 0.965 | pathogenic | -3.187 | Highly Destabilizing | 0.998 | D | 0.836 | deleterious | D | 0.77478352 | None | None | N |
I/T | 0.9089 | likely_pathogenic | 0.9123 | pathogenic | -2.89 | Highly Destabilizing | 0.989 | D | 0.753 | deleterious | D | 0.809679107 | None | None | N |
I/V | 0.0992 | likely_benign | 0.1011 | benign | -1.85 | Destabilizing | 0.333 | N | 0.235 | neutral | D | 0.547397643 | None | None | N |
I/W | 0.9906 | likely_pathogenic | 0.9895 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
I/Y | 0.9696 | likely_pathogenic | 0.9637 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.