Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16326 | 49201;49202;49203 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
N2AB | 14685 | 44278;44279;44280 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
N2A | 13758 | 41497;41498;41499 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
N2B | 7261 | 22006;22007;22008 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
Novex-1 | 7386 | 22381;22382;22383 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
Novex-2 | 7453 | 22582;22583;22584 | chr2:178614538;178614537;178614536 | chr2:179479265;179479264;179479263 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1247538583 | -0.814 | 0.349 | N | 0.431 | 0.14 | 0.156986980423 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 5.82E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1247538583 | -0.814 | 0.349 | N | 0.431 | 0.14 | 0.156986980423 | gnomAD-4.0.0 | 3.18818E-06 | None | None | None | None | N | None | 0 | 4.58169E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1408 | likely_benign | 0.1906 | benign | -0.868 | Destabilizing | 0.349 | N | 0.431 | neutral | N | 0.449487789 | None | None | N |
T/C | 0.5957 | likely_pathogenic | 0.6118 | pathogenic | -0.543 | Destabilizing | 0.996 | D | 0.652 | neutral | None | None | None | None | N |
T/D | 0.8963 | likely_pathogenic | 0.919 | pathogenic | -0.414 | Destabilizing | 0.775 | D | 0.569 | neutral | None | None | None | None | N |
T/E | 0.8562 | likely_pathogenic | 0.8925 | pathogenic | -0.436 | Destabilizing | 0.775 | D | 0.572 | neutral | None | None | None | None | N |
T/F | 0.8438 | likely_pathogenic | 0.8936 | pathogenic | -1.139 | Destabilizing | 0.961 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/G | 0.265 | likely_benign | 0.2979 | benign | -1.086 | Destabilizing | 0.633 | D | 0.615 | neutral | None | None | None | None | N |
T/H | 0.6605 | likely_pathogenic | 0.7125 | pathogenic | -1.425 | Destabilizing | 0.989 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/I | 0.8693 | likely_pathogenic | 0.909 | pathogenic | -0.387 | Destabilizing | 0.949 | D | 0.625 | neutral | D | 0.562342277 | None | None | N |
T/K | 0.7308 | likely_pathogenic | 0.7946 | pathogenic | -0.685 | Destabilizing | 0.633 | D | 0.567 | neutral | None | None | None | None | N |
T/L | 0.5923 | likely_pathogenic | 0.6822 | pathogenic | -0.387 | Destabilizing | 0.775 | D | 0.557 | neutral | None | None | None | None | N |
T/M | 0.2933 | likely_benign | 0.3862 | ambiguous | 0.071 | Stabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
T/N | 0.4566 | ambiguous | 0.5018 | ambiguous | -0.625 | Destabilizing | 0.565 | D | 0.493 | neutral | D | 0.529304912 | None | None | N |
T/P | 0.8792 | likely_pathogenic | 0.9128 | pathogenic | -0.517 | Destabilizing | 0.949 | D | 0.621 | neutral | D | 0.604237849 | None | None | N |
T/Q | 0.6352 | likely_pathogenic | 0.7043 | pathogenic | -0.896 | Destabilizing | 0.923 | D | 0.668 | neutral | None | None | None | None | N |
T/R | 0.6365 | likely_pathogenic | 0.7168 | pathogenic | -0.383 | Destabilizing | 0.923 | D | 0.655 | neutral | None | None | None | None | N |
T/S | 0.1047 | likely_benign | 0.1279 | benign | -0.895 | Destabilizing | 0.014 | N | 0.193 | neutral | N | 0.427949873 | None | None | N |
T/V | 0.6811 | likely_pathogenic | 0.7417 | pathogenic | -0.517 | Destabilizing | 0.775 | D | 0.475 | neutral | None | None | None | None | N |
T/W | 0.963 | likely_pathogenic | 0.9754 | pathogenic | -1.043 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/Y | 0.836 | likely_pathogenic | 0.8769 | pathogenic | -0.797 | Destabilizing | 0.987 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.