Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16332 | 49219;49220;49221 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
N2AB | 14691 | 44296;44297;44298 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
N2A | 13764 | 41515;41516;41517 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
N2B | 7267 | 22024;22025;22026 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
Novex-1 | 7392 | 22399;22400;22401 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
Novex-2 | 7459 | 22600;22601;22602 | chr2:178614520;178614519;178614518 | chr2:179479247;179479246;179479245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs879092258 | None | 0.999 | N | 0.675 | 0.446 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs879092258 | None | 0.999 | N | 0.675 | 0.446 | None | gnomAD-4.0.0 | 2.56733E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79393E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8028 | likely_pathogenic | 0.8307 | pathogenic | -0.78 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.534190228 | None | None | I |
E/C | 0.9909 | likely_pathogenic | 0.9885 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
E/D | 0.8366 | likely_pathogenic | 0.8407 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.61 | neutral | D | 0.585257024 | None | None | I |
E/F | 0.9949 | likely_pathogenic | 0.9957 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
E/G | 0.9129 | likely_pathogenic | 0.9203 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.6662541 | None | None | I |
E/H | 0.9418 | likely_pathogenic | 0.9463 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
E/I | 0.9527 | likely_pathogenic | 0.9658 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | I |
E/K | 0.8058 | likely_pathogenic | 0.8547 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.675 | neutral | N | 0.495801937 | None | None | I |
E/L | 0.9691 | likely_pathogenic | 0.975 | pathogenic | 0.077 | Stabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
E/M | 0.9533 | likely_pathogenic | 0.9618 | pathogenic | 0.527 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
E/N | 0.9142 | likely_pathogenic | 0.9199 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
E/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
E/Q | 0.5429 | ambiguous | 0.5638 | ambiguous | -0.705 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.50619126 | None | None | I |
E/R | 0.8978 | likely_pathogenic | 0.9168 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/S | 0.7693 | likely_pathogenic | 0.785 | pathogenic | -1.08 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/T | 0.7238 | likely_pathogenic | 0.7545 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
E/V | 0.8594 | likely_pathogenic | 0.8913 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.872 | deleterious | N | 0.487810275 | None | None | I |
E/W | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
E/Y | 0.9883 | likely_pathogenic | 0.9897 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.