Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16361 | 49306;49307;49308 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
N2AB | 14720 | 44383;44384;44385 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
N2A | 13793 | 41602;41603;41604 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
N2B | 7296 | 22111;22112;22113 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
Novex-1 | 7421 | 22486;22487;22488 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
Novex-2 | 7488 | 22687;22688;22689 | chr2:178614316;178614315;178614314 | chr2:179479043;179479042;179479041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.193 | N | 0.403 | 0.254 | 0.258779203287 | gnomAD-4.0.0 | 6.84597E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16001E-05 | 0 |
T/R | rs2056892277 | None | 0.627 | N | 0.435 | 0.31 | 0.330589388543 | gnomAD-4.0.0 | 6.84597E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99818E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.093 | likely_benign | 0.0953 | benign | -0.72 | Destabilizing | 0.09 | N | 0.339 | neutral | N | 0.477071693 | None | None | N |
T/C | 0.3688 | ambiguous | 0.3822 | ambiguous | -0.369 | Destabilizing | 0.944 | D | 0.423 | neutral | None | None | None | None | N |
T/D | 0.4687 | ambiguous | 0.4981 | ambiguous | -0.169 | Destabilizing | 0.388 | N | 0.412 | neutral | None | None | None | None | N |
T/E | 0.3567 | ambiguous | 0.3856 | ambiguous | -0.185 | Destabilizing | 0.241 | N | 0.373 | neutral | None | None | None | None | N |
T/F | 0.3232 | likely_benign | 0.3567 | ambiguous | -0.813 | Destabilizing | 0.69 | D | 0.502 | neutral | None | None | None | None | N |
T/G | 0.2453 | likely_benign | 0.2448 | benign | -0.967 | Destabilizing | 0.241 | N | 0.432 | neutral | None | None | None | None | N |
T/H | 0.2839 | likely_benign | 0.2988 | benign | -1.246 | Destabilizing | 0.944 | D | 0.467 | neutral | None | None | None | None | N |
T/I | 0.2183 | likely_benign | 0.2492 | benign | -0.158 | Destabilizing | 0.193 | N | 0.403 | neutral | N | 0.483575687 | None | None | N |
T/K | 0.225 | likely_benign | 0.2409 | benign | -0.73 | Destabilizing | 0.193 | N | 0.367 | neutral | N | 0.482964009 | None | None | N |
T/L | 0.1337 | likely_benign | 0.1439 | benign | -0.158 | Destabilizing | 0.043 | N | 0.385 | neutral | None | None | None | None | N |
T/M | 0.1116 | likely_benign | 0.1177 | benign | 0.146 | Stabilizing | 0.019 | N | 0.357 | neutral | None | None | None | None | N |
T/N | 0.1569 | likely_benign | 0.1653 | benign | -0.595 | Destabilizing | 0.241 | N | 0.383 | neutral | None | None | None | None | N |
T/P | 0.6414 | likely_pathogenic | 0.6795 | pathogenic | -0.313 | Destabilizing | 0.773 | D | 0.436 | neutral | N | 0.471360301 | None | None | N |
T/Q | 0.2513 | likely_benign | 0.2623 | benign | -0.774 | Destabilizing | 0.69 | D | 0.435 | neutral | None | None | None | None | N |
T/R | 0.2019 | likely_benign | 0.2232 | benign | -0.468 | Destabilizing | 0.627 | D | 0.435 | neutral | N | 0.47335012 | None | None | N |
T/S | 0.0938 | likely_benign | 0.0958 | benign | -0.86 | Destabilizing | 0.001 | N | 0.123 | neutral | N | 0.422043819 | None | None | N |
T/V | 0.1646 | likely_benign | 0.1751 | benign | -0.313 | Destabilizing | 0.241 | N | 0.349 | neutral | None | None | None | None | N |
T/W | 0.6757 | likely_pathogenic | 0.7071 | pathogenic | -0.761 | Destabilizing | 0.981 | D | 0.547 | neutral | None | None | None | None | N |
T/Y | 0.3841 | ambiguous | 0.4079 | ambiguous | -0.537 | Destabilizing | 0.818 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.