Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16384 | 49375;49376;49377 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
N2AB | 14743 | 44452;44453;44454 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
N2A | 13816 | 41671;41672;41673 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
N2B | 7319 | 22180;22181;22182 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
Novex-1 | 7444 | 22555;22556;22557 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
Novex-2 | 7511 | 22756;22757;22758 | chr2:178614247;178614246;178614245 | chr2:179478974;179478973;179478972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | rs1559808274 | -0.322 | 1.0 | D | 0.821 | 0.556 | 0.523082183605 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
T/P | rs1559808274 | -0.322 | 1.0 | D | 0.821 | 0.556 | 0.523082183605 | gnomAD-4.0.0 | 1.59351E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86146E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3348 | likely_benign | 0.2614 | benign | -0.617 | Destabilizing | 0.999 | D | 0.545 | neutral | D | 0.575726709 | None | None | I |
T/C | 0.8093 | likely_pathogenic | 0.7641 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
T/D | 0.9099 | likely_pathogenic | 0.8694 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
T/E | 0.858 | likely_pathogenic | 0.7884 | pathogenic | -0.218 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
T/F | 0.7985 | likely_pathogenic | 0.7467 | pathogenic | -0.859 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
T/G | 0.6716 | likely_pathogenic | 0.5802 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
T/H | 0.7432 | likely_pathogenic | 0.6842 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
T/I | 0.6499 | likely_pathogenic | 0.5412 | ambiguous | -0.184 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.487702449 | None | None | I |
T/K | 0.7044 | likely_pathogenic | 0.6078 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.578653203 | None | None | I |
T/L | 0.3554 | ambiguous | 0.2753 | benign | -0.184 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
T/M | 0.2724 | likely_benign | 0.2096 | benign | 0.144 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
T/N | 0.3751 | ambiguous | 0.3053 | benign | -0.479 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
T/P | 0.8926 | likely_pathogenic | 0.8515 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.821 | deleterious | D | 0.754145703 | None | None | I |
T/Q | 0.6436 | likely_pathogenic | 0.5549 | ambiguous | -0.721 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
T/R | 0.6571 | likely_pathogenic | 0.5678 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.509111828 | None | None | I |
T/S | 0.2557 | likely_benign | 0.2163 | benign | -0.714 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.517744053 | None | None | I |
T/V | 0.5011 | ambiguous | 0.406 | ambiguous | -0.297 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
T/W | 0.9526 | likely_pathogenic | 0.9393 | pathogenic | -0.804 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
T/Y | 0.8296 | likely_pathogenic | 0.7836 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.