Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16388 | 49387;49388;49389 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
N2AB | 14747 | 44464;44465;44466 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
N2A | 13820 | 41683;41684;41685 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
N2B | 7323 | 22192;22193;22194 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
Novex-1 | 7448 | 22567;22568;22569 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
Novex-2 | 7515 | 22768;22769;22770 | chr2:178614235;178614234;178614233 | chr2:179478962;179478961;179478960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1299253449 | -0.433 | 0.942 | D | 0.661 | 0.472 | 0.675557862682 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
V/M | rs1299253449 | -0.433 | 0.942 | D | 0.661 | 0.472 | 0.675557862682 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1299253449 | -0.433 | 0.942 | D | 0.661 | 0.472 | 0.675557862682 | gnomAD-4.0.0 | 2.56641E-06 | None | None | None | None | N | None | 1.69497E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.85014E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8577 | likely_pathogenic | 0.8244 | pathogenic | -2.134 | Highly Destabilizing | 0.822 | D | 0.597 | neutral | D | 0.73348747 | None | None | N |
V/C | 0.9752 | likely_pathogenic | 0.9714 | pathogenic | -1.4 | Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -2.953 | Highly Destabilizing | 0.993 | D | 0.909 | deleterious | None | None | None | None | N |
V/E | 0.9958 | likely_pathogenic | 0.9944 | pathogenic | -2.599 | Highly Destabilizing | 0.971 | D | 0.883 | deleterious | D | 0.790709672 | None | None | N |
V/F | 0.923 | likely_pathogenic | 0.9058 | pathogenic | -1.134 | Destabilizing | 0.915 | D | 0.778 | deleterious | None | None | None | None | N |
V/G | 0.9623 | likely_pathogenic | 0.954 | pathogenic | -2.786 | Highly Destabilizing | 0.971 | D | 0.895 | deleterious | D | 0.790709672 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9987 | pathogenic | -2.762 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.0901 | likely_benign | 0.0892 | benign | -0.222 | Destabilizing | 0.559 | D | 0.502 | neutral | None | None | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9958 | pathogenic | -1.573 | Destabilizing | 0.978 | D | 0.881 | deleterious | None | None | None | None | N |
V/L | 0.3977 | ambiguous | 0.385 | ambiguous | -0.222 | Destabilizing | 0.006 | N | 0.323 | neutral | N | 0.500416292 | None | None | N |
V/M | 0.7239 | likely_pathogenic | 0.692 | pathogenic | -0.503 | Destabilizing | 0.942 | D | 0.661 | neutral | D | 0.629314164 | None | None | N |
V/N | 0.9968 | likely_pathogenic | 0.9957 | pathogenic | -2.359 | Highly Destabilizing | 0.993 | D | 0.914 | deleterious | None | None | None | None | N |
V/P | 0.9959 | likely_pathogenic | 0.9942 | pathogenic | -0.842 | Destabilizing | 0.993 | D | 0.898 | deleterious | None | None | None | None | N |
V/Q | 0.9952 | likely_pathogenic | 0.9939 | pathogenic | -1.896 | Destabilizing | 0.993 | D | 0.907 | deleterious | None | None | None | None | N |
V/R | 0.9936 | likely_pathogenic | 0.9913 | pathogenic | -1.924 | Destabilizing | 0.978 | D | 0.914 | deleterious | None | None | None | None | N |
V/S | 0.9852 | likely_pathogenic | 0.9801 | pathogenic | -2.86 | Highly Destabilizing | 0.978 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.9049 | likely_pathogenic | 0.8878 | pathogenic | -2.325 | Highly Destabilizing | 0.86 | D | 0.596 | neutral | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -1.637 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/Y | 0.9959 | likely_pathogenic | 0.9941 | pathogenic | -1.321 | Destabilizing | 0.978 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.