Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16411 | 49456;49457;49458 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
N2AB | 14770 | 44533;44534;44535 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
N2A | 13843 | 41752;41753;41754 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
N2B | 7346 | 22261;22262;22263 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
Novex-1 | 7471 | 22636;22637;22638 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
Novex-2 | 7538 | 22837;22838;22839 | chr2:178614166;178614165;178614164 | chr2:179478893;179478892;179478891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.003 | N | 0.203 | 0.068 | 0.269558022972 | gnomAD-4.0.0 | 1.59395E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86197E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6 | likely_pathogenic | 0.6632 | pathogenic | -0.498 | Destabilizing | 0.404 | N | 0.646 | neutral | None | None | None | None | N |
K/C | 0.7398 | likely_pathogenic | 0.7724 | pathogenic | -0.571 | Destabilizing | 0.991 | D | 0.793 | deleterious | None | None | None | None | N |
K/D | 0.8767 | likely_pathogenic | 0.9007 | pathogenic | 0.2 | Stabilizing | 0.826 | D | 0.672 | neutral | None | None | None | None | N |
K/E | 0.3653 | ambiguous | 0.4479 | ambiguous | 0.29 | Stabilizing | 0.338 | N | 0.609 | neutral | N | 0.47413498 | None | None | N |
K/F | 0.82 | likely_pathogenic | 0.8514 | pathogenic | -0.365 | Destabilizing | 0.967 | D | 0.765 | deleterious | None | None | None | None | N |
K/G | 0.8215 | likely_pathogenic | 0.8406 | pathogenic | -0.812 | Destabilizing | 0.575 | D | 0.659 | neutral | None | None | None | None | N |
K/H | 0.3314 | likely_benign | 0.3469 | ambiguous | -1.04 | Destabilizing | 0.826 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/I | 0.3736 | ambiguous | 0.4481 | ambiguous | 0.288 | Stabilizing | 0.906 | D | 0.767 | deleterious | None | None | None | None | N |
K/L | 0.396 | ambiguous | 0.439 | ambiguous | 0.288 | Stabilizing | 0.575 | D | 0.659 | neutral | None | None | None | None | N |
K/M | 0.3235 | likely_benign | 0.386 | ambiguous | 0.086 | Stabilizing | 0.965 | D | 0.714 | prob.delet. | D | 0.524630648 | None | None | N |
K/N | 0.7403 | likely_pathogenic | 0.7906 | pathogenic | -0.273 | Destabilizing | 0.782 | D | 0.593 | neutral | N | 0.477117039 | None | None | N |
K/P | 0.8196 | likely_pathogenic | 0.8531 | pathogenic | 0.056 | Stabilizing | 0.906 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/Q | 0.1959 | likely_benign | 0.2284 | benign | -0.336 | Destabilizing | 0.003 | N | 0.358 | neutral | N | 0.497874196 | None | None | N |
K/R | 0.0823 | likely_benign | 0.0771 | benign | -0.362 | Destabilizing | 0.003 | N | 0.203 | neutral | N | 0.451456569 | None | None | N |
K/S | 0.6903 | likely_pathogenic | 0.7485 | pathogenic | -0.946 | Destabilizing | 0.404 | N | 0.563 | neutral | None | None | None | None | N |
K/T | 0.2865 | likely_benign | 0.3655 | ambiguous | -0.654 | Destabilizing | 0.505 | D | 0.653 | neutral | N | 0.415209907 | None | None | N |
K/V | 0.3527 | ambiguous | 0.4189 | ambiguous | 0.056 | Stabilizing | 0.826 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/W | 0.7631 | likely_pathogenic | 0.7702 | pathogenic | -0.256 | Destabilizing | 0.991 | D | 0.778 | deleterious | None | None | None | None | N |
K/Y | 0.6849 | likely_pathogenic | 0.7148 | pathogenic | 0.042 | Stabilizing | 0.906 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.