Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16413 | 49462;49463;49464 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
N2AB | 14772 | 44539;44540;44541 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
N2A | 13845 | 41758;41759;41760 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
N2B | 7348 | 22267;22268;22269 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
Novex-1 | 7473 | 22642;22643;22644 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
Novex-2 | 7540 | 22843;22844;22845 | chr2:178614160;178614159;178614158 | chr2:179478887;179478886;179478885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.454 | D | 0.461 | 0.302 | 0.286848849266 | gnomAD-4.0.0 | 1.59389E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88437E-05 | 0 | 0 | 0 | 0 |
T/N | None | None | 0.966 | D | 0.458 | 0.292 | 0.297718772494 | gnomAD-4.0.0 | 1.59389E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41546E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0893 | likely_benign | 0.0831 | benign | -0.571 | Destabilizing | 0.005 | N | 0.101 | neutral | N | 0.475639142 | None | None | N |
T/C | 0.3376 | likely_benign | 0.3376 | benign | -0.38 | Destabilizing | 0.974 | D | 0.502 | neutral | None | None | None | None | N |
T/D | 0.4604 | ambiguous | 0.4523 | ambiguous | 0.381 | Stabilizing | 0.974 | D | 0.513 | neutral | None | None | None | None | N |
T/E | 0.3795 | ambiguous | 0.3748 | ambiguous | 0.342 | Stabilizing | 0.842 | D | 0.484 | neutral | None | None | None | None | N |
T/F | 0.2944 | likely_benign | 0.2916 | benign | -0.843 | Destabilizing | 0.949 | D | 0.577 | neutral | None | None | None | None | N |
T/G | 0.176 | likely_benign | 0.1623 | benign | -0.763 | Destabilizing | 0.728 | D | 0.513 | neutral | None | None | None | None | N |
T/H | 0.3024 | likely_benign | 0.3049 | benign | -0.989 | Destabilizing | 0.998 | D | 0.552 | neutral | None | None | None | None | N |
T/I | 0.2141 | likely_benign | 0.2162 | benign | -0.174 | Destabilizing | 0.454 | N | 0.461 | neutral | D | 0.549988013 | None | None | N |
T/K | 0.262 | likely_benign | 0.2638 | benign | -0.431 | Destabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | N |
T/L | 0.1037 | likely_benign | 0.1013 | benign | -0.174 | Destabilizing | 0.007 | N | 0.203 | neutral | None | None | None | None | N |
T/M | 0.1039 | likely_benign | 0.0996 | benign | -0.016 | Destabilizing | 0.949 | D | 0.521 | neutral | None | None | None | None | N |
T/N | 0.1199 | likely_benign | 0.1155 | benign | -0.272 | Destabilizing | 0.966 | D | 0.458 | neutral | D | 0.522914919 | None | None | N |
T/P | 0.1214 | likely_benign | 0.1204 | benign | -0.276 | Destabilizing | 0.966 | D | 0.528 | neutral | N | 0.486369778 | None | None | N |
T/Q | 0.2377 | likely_benign | 0.2353 | benign | -0.451 | Destabilizing | 0.974 | D | 0.525 | neutral | None | None | None | None | N |
T/R | 0.2471 | likely_benign | 0.2472 | benign | -0.196 | Destabilizing | 0.974 | D | 0.525 | neutral | None | None | None | None | N |
T/S | 0.0964 | likely_benign | 0.0951 | benign | -0.586 | Destabilizing | 0.454 | N | 0.451 | neutral | N | 0.473464937 | None | None | N |
T/V | 0.1341 | likely_benign | 0.1371 | benign | -0.276 | Destabilizing | 0.029 | N | 0.105 | neutral | None | None | None | None | N |
T/W | 0.6454 | likely_pathogenic | 0.6461 | pathogenic | -0.784 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
T/Y | 0.355 | ambiguous | 0.3377 | benign | -0.532 | Destabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.