Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16420 | 49483;49484;49485 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
N2AB | 14779 | 44560;44561;44562 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
N2A | 13852 | 41779;41780;41781 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
N2B | 7355 | 22288;22289;22290 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
Novex-1 | 7480 | 22663;22664;22665 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
Novex-2 | 7547 | 22864;22865;22866 | chr2:178614139;178614138;178614137 | chr2:179478866;179478865;179478864 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs2056859473 | None | 0.999 | N | 0.472 | 0.289 | 0.229264304666 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs2056859473 | None | 0.999 | N | 0.472 | 0.289 | 0.229264304666 | gnomAD-4.0.0 | 6.58857E-06 | None | None | None | None | N | None | 0 | 6.57117E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1402412207 | -1.606 | 1.0 | D | 0.763 | 0.474 | 0.518585293439 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1402412207 | -1.606 | 1.0 | D | 0.763 | 0.474 | 0.518585293439 | gnomAD-4.0.0 | 1.59393E-06 | None | None | None | None | N | None | 5.67408E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs764682084 | -0.537 | 0.999 | N | 0.613 | 0.403 | 0.447609009685 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 3.57E-05 | 0 |
E/K | rs764682084 | -0.537 | 0.999 | N | 0.613 | 0.403 | 0.447609009685 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs764682084 | -0.537 | 0.999 | N | 0.613 | 0.403 | 0.447609009685 | gnomAD-4.0.0 | 6.20235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.63203E-06 | 1.09835E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2533 | likely_benign | 0.2179 | benign | -0.884 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | D | 0.564289855 | None | None | N |
E/C | 0.9252 | likely_pathogenic | 0.8971 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.2803 | likely_benign | 0.2446 | benign | -1.334 | Destabilizing | 0.999 | D | 0.472 | neutral | N | 0.467787014 | None | None | N |
E/F | 0.9524 | likely_pathogenic | 0.9279 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.4376 | ambiguous | 0.3569 | ambiguous | -1.294 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.580346342 | None | None | N |
E/H | 0.7982 | likely_pathogenic | 0.7309 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/I | 0.5445 | ambiguous | 0.4572 | ambiguous | 0.247 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/K | 0.3713 | ambiguous | 0.2894 | benign | -0.838 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.508093089 | None | None | N |
E/L | 0.6898 | likely_pathogenic | 0.5991 | pathogenic | 0.247 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
E/M | 0.6415 | likely_pathogenic | 0.5642 | pathogenic | 0.797 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/N | 0.4675 | ambiguous | 0.399 | ambiguous | -1.329 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/P | 0.6838 | likely_pathogenic | 0.6058 | pathogenic | -0.108 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.1965 | likely_benign | 0.1674 | benign | -1.143 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.471927637 | None | None | N |
E/R | 0.5717 | likely_pathogenic | 0.4803 | ambiguous | -0.601 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.3503 | ambiguous | 0.3017 | benign | -1.709 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.2862 | likely_benign | 0.2365 | benign | -1.362 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/V | 0.3337 | likely_benign | 0.2747 | benign | -0.108 | Destabilizing | 1.0 | D | 0.796 | deleterious | D | 0.551105752 | None | None | N |
E/W | 0.9851 | likely_pathogenic | 0.9746 | pathogenic | -0.097 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/Y | 0.9024 | likely_pathogenic | 0.8599 | pathogenic | -0.059 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.