Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1644 | 5155;5156;5157 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
N2AB | 1644 | 5155;5156;5157 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
N2A | 1644 | 5155;5156;5157 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
N2B | 1598 | 5017;5018;5019 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
Novex-1 | 1598 | 5017;5018;5019 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
Novex-2 | 1598 | 5017;5018;5019 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
Novex-3 | 1644 | 5155;5156;5157 | chr2:178776934;178776933;178776932 | chr2:179641661;179641660;179641659 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2092286862 | None | 0.961 | N | 0.617 | 0.544 | 0.324986149311 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85845E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9774 | likely_pathogenic | 0.9703 | pathogenic | -0.984 | Destabilizing | 0.97 | D | 0.66 | neutral | None | None | None | None | N |
K/C | 0.9836 | likely_pathogenic | 0.9749 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/D | 0.9971 | likely_pathogenic | 0.9958 | pathogenic | -0.921 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/E | 0.968 | likely_pathogenic | 0.9547 | pathogenic | -0.75 | Destabilizing | 0.961 | D | 0.617 | neutral | N | 0.502183208 | None | None | N |
K/F | 0.9914 | likely_pathogenic | 0.9881 | pathogenic | -0.603 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/G | 0.9892 | likely_pathogenic | 0.9859 | pathogenic | -1.404 | Destabilizing | 0.985 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/H | 0.8431 | likely_pathogenic | 0.7964 | pathogenic | -1.784 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.9568 | likely_pathogenic | 0.9455 | pathogenic | 0.144 | Stabilizing | 0.998 | D | 0.744 | deleterious | D | 0.555401178 | None | None | N |
K/L | 0.9255 | likely_pathogenic | 0.9007 | pathogenic | 0.144 | Stabilizing | 0.97 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/M | 0.8829 | likely_pathogenic | 0.848 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/N | 0.987 | likely_pathogenic | 0.9812 | pathogenic | -1.123 | Destabilizing | 0.994 | D | 0.637 | neutral | N | 0.509793035 | None | None | N |
K/P | 0.9929 | likely_pathogenic | 0.9926 | pathogenic | -0.204 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
K/Q | 0.7743 | likely_pathogenic | 0.6965 | pathogenic | -1.091 | Destabilizing | 0.989 | D | 0.659 | neutral | N | 0.509452657 | None | None | N |
K/R | 0.1382 | likely_benign | 0.1146 | benign | -0.93 | Destabilizing | 0.031 | N | 0.199 | neutral | N | 0.481994033 | None | None | N |
K/S | 0.9875 | likely_pathogenic | 0.9832 | pathogenic | -1.74 | Destabilizing | 0.985 | D | 0.619 | neutral | None | None | None | None | N |
K/T | 0.9501 | likely_pathogenic | 0.9329 | pathogenic | -1.337 | Destabilizing | 0.98 | D | 0.699 | prob.neutral | N | 0.504696727 | None | None | N |
K/V | 0.9415 | likely_pathogenic | 0.9275 | pathogenic | -0.204 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/W | 0.9851 | likely_pathogenic | 0.9784 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/Y | 0.9771 | likely_pathogenic | 0.9661 | pathogenic | -0.201 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.